RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PLXDC2Q6UX71 529 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 SULF2Q8IWU5 870 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OR51T1Q8NGJ9 327 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OR5H2Q8NGV7 314 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OR4K15Q8NH41 348 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ADAMTS17Q8TE56 1095 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 NUDCD2Q8WVJ2 157 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 PSMF1Q92530 271 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 MARVELD3Q96A59 401 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 FBXO17Q96EF6 278 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 MRPS24Q96EL2 167 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 MS4A3Q96HJ5 214 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 REEP6Q96HR9 211 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 LYZL4Q96KX0 146 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 C1orf147Q96MC9 270 aaPredicted RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 SLC6A7Q99884 636 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 GAL3ST1Q99999 423 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 SELENOIQ9C0D9 397 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 METTL9Q9H1A3 318 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 OPA3Q9H6K4 179 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 GPR35Q9HC97 309 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 CA10Q9NS85 328 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 ZNF319Q9P2F9 582 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 KCNN3Q9UGI6 736 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 EDARQ9UNE0 448 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 SLC7A11Q9UPY5 501 aa5.81□□□□□ -1.48
USP28-206ENST00000538224 NOSIPQ9Y314 301 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 NOP16Q9Y3C1 178 aaKnown RBP5.81□□□□□ -1.48
USP28-206ENST00000538224 A0A0A6YYD4 124 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 A0A0B4J2A0 478 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 IGKV1-9A0A0C4DH69 117 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 A0A0D9SG52 128 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 LOC105371267A0A1B0GV96 52 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RFPL4AA6NLU0 287 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 MCRIP1C9JLW8 97 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZNF587BE7ETH6 402 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RFPL4AL1F8VTS6 287 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RPL36A-HNRNPH2H7BZ11 118 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CDX4O14627 284 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 SSX5O60225 188 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 NEURL1O76050 574 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 TOXO94900 526 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 DUS4LO95620 317 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 CD8AP01732 235 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CSTBP04080 98 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 LCATP04180 440 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FCGR2AP12318 317 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CD46P15529 392 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FAHP16930 419 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZNF32P17041 273 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 AMY2BP19961 511 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 M6PRP20645 277 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FPR2P25090 351 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 AVPR2P30518 371 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 HRH1P35367 487 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RBP2P50120 134 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 LHX2P50458 406 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 NUBP1P53384 320 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RRADP55042 308 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CLDN15P56746 228 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CYCSP99999 105 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 PLGLB1Q02325 96 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 EXOSC2Q13868 293 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 ZNF345Q14585 488 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RNPS1Q15287 305 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 SURF2Q15527 256 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 OR1C1Q15619 314 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 UBE2V2Q15819 145 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CSRP2Q16527 193 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 NKPD1Q17RQ9 610 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 HYAL4Q2M3T9 481 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CEACAM16Q2WEN9 425 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 SLC22A6Q4U2R8 563 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 C6orf183Q5T699 404 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 HES3Q5TGS1 186 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 SIGIRRQ6IA17 410 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 TMEM65Q6PI78 240 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 C3P1Q6ZMU1 363 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 RFPL4BQ6ZWI9 263 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 GALNTL5Q7Z4T8 443 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 HOGA1Q86XE5 327 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 OR8H3Q8N146 312 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 OR52B4Q8NGK2 314 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 OR13C8Q8NGS7 320 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 MITD1Q8WV92 249 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 FBXW5Q969U6 566 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 BORCS8Q96FH0 119 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ALKBH3Q96Q83 286 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 NKX3-1Q99801 234 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 PDCD10Q9BUL8 212 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 DPCDQ9BVM2 203 aaPredicted RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 OR2H1Q9GZK4 316 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 PRDM14Q9GZV8 571 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 CHST6Q9GZX3 395 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 HEXA-AS1Q9H8Q6 139 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 ZMAT3Q9HA38 289 aaKnown RBP5.8□□□□□ -1.48
USP28-206ENST00000538224 GP6Q9HCN6 339 aa5.8□□□□□ -1.48
USP28-206ENST00000538224 DEPPQ9NTK1 212 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms