RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 POU3F4P49335 361 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 GFRA1P56159 465 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ENDOGQ14249 297 aaKnown RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 SGCAQ16586 387 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ANKRD16Q6P6B7 361 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 MEX3BQ6ZN04 569 aaKnown RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 C20orf196Q8IYI0 205 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 BOLLQ8N9W6 283 aaKnown RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ST8SIA2Q92186 375 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 FAM3DQ96BQ1 224 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF775Q96BV0 537 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 FGGYQ96C11 551 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 SF3B5Q9BWJ5 86 aaKnown RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 HES7Q9BYE0 225 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 IFT46Q9NQC8 304 aa9.44□□□□□ -0.9
CLIP1-210ENST00000538120 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF716A6NP11 495 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 DNASE2O00115 360 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-210ENST00000538120 CXCL13O43927 109 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 TRAPPC6AO75865 159 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 PRKXP51817 358 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 CARD18P57730 90 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
CLIP1-210ENST00000538120 SPOCK1Q08629 439 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 LY6G6FQ5SQ64 297 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 CLVS2Q5SYC1 327 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 OR2M7Q8NG81 312 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 ROBO4Q8WZ75 1007 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 NKD1Q969G9 470 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 SOX7Q9BT81 388 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 EXO5Q9H790 373 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 CKLFQ9UBR5 152 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 LOC100289279A0A1B0GTE1 492 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 LOC390937A0A1W2PQ73 354 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 DHHO43323 396 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 GDF1P27539 372 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 BEX5Q5H9J7 111 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 GLT8D1Q68CQ7 371 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF787Q6DD87 383 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 ELP2Q6IA86 826 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 OR1J2Q8NGS2 313 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 OR2V1Q8NHB1 315 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-210ENST00000538120 POFUT1Q9H488 388 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 PLA2G3Q9NZ20 509 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 FLVCR1Q9Y5Y0 555 aa9.43□□□□□ -0.9
CLIP1-210ENST00000538120 DCDC2BA2VCK2 349 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 C5orf63A6NC05 138 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 E9PLN8 166 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 M0QYG6 137 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 LDLRAD4O15165 306 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 SLC2A1P11166 492 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 MSR1P21757 451 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 CTSSP25774 331 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 HSD11B1P28845 292 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 FAUP35544 74 aaKnown RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF121P58317 390 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 HIST1H3AP68431 136 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 DEFA5Q01523 94 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 RSPO1Q2MKA7 263 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 HIST2H3PS2Q5TEC6 136 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ABHD17BQ5VST6 288 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF529Q6P280 563 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 HIST2H3AQ71DI3 136 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 TMED4Q7Z7H5 227 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 OR8B12Q8NGG6 310 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 OR10K1Q8NGX5 313 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 OR6K3Q8NGY3 331 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 OR10D3Q8NH80 312 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 OR51E1Q8TCB6 317 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 NELFAQ9H3P2 528 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZMAT3Q9HA38 289 aaKnown RBP9.42□□□□□ -0.9
CLIP1-210ENST00000538120 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 SYT7O43581 403 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 CELA3AP09093 270 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 CSF1P09603 554 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 AKAIN1P0CW23 69 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 LIPCP11150 499 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 NR2C1P13056 603 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ITGA3P26006 1051 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 HTR2CP28335 458 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 RFC3P40938 356 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF674Q2M3X9 581 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 LRRC37A5PQ49AS3 106 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ABLIM2Q6H8Q1 611 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF813Q6ZN06 617 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 CLEC1AQ8NC01 280 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 PXT1Q8NFP0 134 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 LRRC46Q96FV0 321 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 ZNF75AQ96N20 296 aa9.42□□□□□ -0.9
CLIP1-210ENST00000538120 FAM173AQ9BQD7 235 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms