RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MPLP40238 635 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 PTGFRP43088 359 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM50BP56557 158 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 Q0VFX4 171 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 AANATQ16613 207 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 AKIRIN2Q53H80 203 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 ATP1A1-AS1Q5TC04 95 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 HDDC2Q7Z4H3 204 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 TMEM200AQ86VY9 491 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 IL22RA1Q8N6P7 574 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 INO80EQ8NBZ0 244 aaPredicted RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 NEK7Q8TDX7 302 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SPTSSAQ969W0 71 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 LYZL4Q96KX0 146 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 FAAP24Q9BTP7 215 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 MBD2Q9UBB5 411 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SHPKQ9UHJ6 478 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 TEX13DA0A0J9YY54 714 aaPredicted RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 A0A1W2PNV4 684 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 PINLYPA6NC86 204 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF850A8MQ14 1090 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 APOC3P02656 99 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 ITGB2P05107 769 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 DUSP1P28562 367 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 NTF4P34130 210 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 MEF2DQ14814 521 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 MOB3CQ70IA8 216 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SCPEP1Q9HB40 452 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 DEPPQ9NTK1 212 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 DOCK10Q96BY6 2186 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SHANK1Q9Y566 2161 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 DIDO1Q9BTC0 2240 aaKnown RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 EIF1BO60739 113 aaKnown RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 HIST1H1DP16402 221 aaKnown RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 MLF1P58340 268 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 GRB2P62993 217 aaKnown RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 DEFA5Q01523 94 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SCRN3Q0VDG4 424 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 BTN1A1Q13410 526 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 ENDOGQ14249 297 aaKnown RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 FGFBP3Q8TAT2 258 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 REEP6Q96HR9 211 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SMIM3Q9BZL3 60 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 PROK2Q9HC23 129 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SLC17A5Q9NRA2 495 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 SDHAF2Q9NX18 166 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 PTTG3PQ9NZH4 202 aa7.64□□□□□ -1.19
UBE3B-208ENST00000538070 FBXO9Q9UK97 447 aaPredicted RBP7.64□□□□□ -1.19
UBE3B-208ENST00000538070 C9orf170A2RU37 121 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 MPTX1A8MV57 137 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF735P0CB33 412 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ZNF17P17021 662 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 SP6Q3SY56 376 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ABHD17BQ5VST6 288 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PPP1R32Q7Z5V6 425 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 C5orf24Q7Z6I8 188 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 FADS6Q8N9I5 356 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 SPERTQ8NA61 448 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 OR5T2Q8NGG2 359 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 OR56B1Q8NGI3 324 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 AQP3Q92482 292 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 RBPMSQ93062 196 aaKnown RBP7.63□□□□□ -1.19
UBE3B-208ENST00000538070 FBXW5Q969U6 566 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 BORCS8Q96FH0 119 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 EMC3Q9P0I2 261 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 POLEQ07864 2286 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 HLA-HP01893 362 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ACKR3P25106 362 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 RAC1P63000 192 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 MC2RQ01718 297 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ESPL1Q14674 2120 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 IGFBP7Q16270 282 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 CLEC9AQ6UXN8 241 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PGAP1Q75T13 922 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 LYG2Q86SG7 212 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 NAXDQ8IW45 347 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 MED30Q96HR3 178 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 LINC00052Q96N35 136 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 CDC6Q99741 560 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ANGPTL4Q9BY76 406 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PARP12Q9H0J9 701 aaKnown RBP7.63□□□□□ -1.19
UBE3B-208ENST00000538070 SLC6A15Q9H2J7 730 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 WDR54Q9H977 334 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 FOXJ2Q9P0K8 574 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 CCDC163A0A0D9SF12 145 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 RPS10-NUDT3A0A1W2PQS6 291 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 A0A1W2PR80 420 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 OR2A4O95047 310 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 CASRP41180 1078 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 ZXDAP98168 799 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 FAM209AQ5JX71 171 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 LY6G6FQ5SQ64 297 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PXDC1Q5TGL8 231 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 TSPO2Q5TGU0 170 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PLCXD3Q63HM9 321 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 WDR5BQ86VZ2 330 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 PDZD9Q8IXQ8 264 aa7.63□□□□□ -1.19
UBE3B-208ENST00000538070 SEMA6DQ8NFY4 1073 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms