RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NXPE4Q6UWF7 544 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 RCBTB1Q8NDN9 531 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 OR2V1Q8NHB1 315 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 TSEN15Q8WW01 171 aaKnown RBP7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 PTX4Q96A99 478 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF700Q9H0M5 742 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF701Q9NV72 531 aaPredicted RBP7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 NSG2Q9Y328 171 aa7.59□□□□□ -1.2
SRGAP1-202ENST00000537556 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 PLPP1O14494 284 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 FPR2P25090 351 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ICAM4Q14773 271 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 TCEAL5Q5H9L2 206 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 VWA1Q6PCB0 445 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 DPY19L2P2Q6ZN68 376 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC24A5Q71RS6 500 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 C16orf59Q7L2K0 433 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 STPG4Q8N801 248 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ERGIC1Q969X5 290 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 IGSF21Q96ID5 467 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 RXFP3Q9NSD7 469 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 LHX3Q9UBR4 397 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CKLFQ9UBR5 152 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 LAMP3Q9UQV4 416 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF443Q9Y2A4 671 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 MRPS2Q9Y399 296 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 PAM16Q9Y3D7 125 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 DOCK6Q96HP0 2047 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 IGHV2OR16-5A0A0B4J2B6 119 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 UPK3AO75631 287 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 PIAS2O75928 621 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 DDNO94850 711 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 HBE1P02100 147 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 HIST1H1CP16403 213 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CNN1P51911 297 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CLDN6P56747 220 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 RPL23AP62750 156 aaKnown RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 NHLH1Q02575 133 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CDKN3Q16667 212 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ANKRD55Q3KP44 614 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CCSMST1Q4G0I0 132 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 LDLRAD2Q5SZI1 272 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 OR4C11Q6IEV9 310 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM156Q8N614 296 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM37Q8WXS4 190 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF845Q96IR2 970 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 OR5B12Q96R08 314 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 OR7D2Q96RA2 312 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 C5orf66Q9H5L9 145 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 MTHFD2LQ9H903 347 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ELL3Q9HB65 397 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC2A9Q9NRM0 540 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM106BQ9NUM4 274 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 C1orf123Q9NWV4 160 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 PLXNB3Q9ULL4 1909 aa7.58□□□□□ -1.2
SRGAP1-202ENST00000537556 CHD3Q12873 2000 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 BTN3A2P78410 334 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 CCL20P78556 96 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 AGBL4Q5VU57 503 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 LRRC69Q6ZNQ3 347 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 NUP54Q7Z3B4 507 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 OR5L1Q8NGL2 311 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 FNDC9Q8TBE3 224 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 GLYATL1Q969I3 302 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 RNF166Q96A37 237 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 FGGYQ96C11 551 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 TNFRSF13CQ96RJ3 184 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 NUDT9Q9BW91 350 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM9BQ9NQ34 198 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 TUBG2Q9NRH3 451 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 FLRT3Q9NZU0 649 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 ST3GAL6Q9Y274 331 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 LSM5Q9Y4Y9 91 aaKnown RBP7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 A0A1W2PR48 441 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 MAP1LC3B2A6NCE7 125 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 GPR137BO60478 399 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 CCKBRP32239 447 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 THPOP40225 353 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 GLYATL3Q5SZD4 288 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 Q7L0L9 218 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 GVQW1Q8N7I0 195 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 NPEPL1Q8NDH3 523 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 PTPMT1Q8WUK0 201 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF480Q8WV37 535 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM230Q96A57 120 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 CMKLR1Q99788 373 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 MAP1LC3BQ9GZQ8 125 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 SH3BGRL3Q9H299 93 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 SOHLH2Q9NX45 425 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 TUBD1Q9UJT1 453 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC45A2Q9UMX9 530 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 KCNE3Q9Y6H6 103 aa7.57□□□□□ -1.2
SRGAP1-202ENST00000537556 A0A1B0GVT2 93 aa7.56□□□□□ -1.2
SRGAP1-202ENST00000537556 CTSVO60911 334 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms