RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SERPINB8P50452 374 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ATP4BP51164 291 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 CLDN17P56750 224 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 SLC35A1P78382 337 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 UAP1Q16222 522 aaPredicted RBP4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF678Q5SXM1 525 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 REP15Q6BDI9 236 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 NOXRED1Q6NXP6 359 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 NIPAL3Q6P499 406 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF841Q6ZN19 808 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 GRINAQ7Z429 371 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 LINC00612Q8N6U2 182 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 Q8NFD4 153 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 CLHC1Q8NHS4 586 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF563Q8TA94 476 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM234Q8WY98 164 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF75AQ96N20 296 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF317Q96PQ6 595 aaPredicted RBP4.13□□□□□ -1.75
CLIP1-207ENST00000536634 SDF2Q99470 211 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 GAL3ST1Q99999 423 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 CHIAQ9BZP6 476 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF385DQ9H6B1 395 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 MARCH7Q9H992 704 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 ZCCHC3Q9NUD5 404 aaKnown RBP4.13□□□□□ -1.75
CLIP1-207ENST00000536634 DCAF16Q9NXF7 216 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 UBAP1Q9NZ09 502 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 PURGQ9UJV8 347 aaKnown RBP4.13□□□□□ -1.75
CLIP1-207ENST00000536634 TMCO1Q9UM00 188 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 SNX12Q9UMY4 172 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 AUP1Q9Y679 476 aa4.13□□□□□ -1.75
CLIP1-207ENST00000536634 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 HERC2O95714 4834 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 HECTD4Q9Y4D8 3996 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PPIAL4EA0A075B759 164 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TMED7-TICAM2A0A0A6YYA0 188 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PPIAL4CA0A0B4J2A2 164 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 CLDN25C9JDP6 229 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PPIAL4DF5H284 164 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 EIF3HO15372 352 aaKnown RBP eCLIP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 EIF1BO60739 113 aaKnown RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SHOX2O60902 331 aaPredicted RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 CLPXO76031 633 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SUPT7LO94864 414 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 HLA-HP01893 362 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 GSTA2P09210 222 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PPIAL4FP0DN26 164 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF14P17017 642 aaPredicted RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ARR3P36575 388 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 CRYBB2P43320 205 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SH3BGRP55822 239 aaPredicted RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ERVS71-1P61550 626 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 BTG1P62324 171 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 NAB1Q13506 487 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PDE7AQ13946 482 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 CEACAM7Q14002 265 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF146Q15072 292 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 OR7A5Q15622 319 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF141Q15928 474 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 DEFB112Q30KQ8 113 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SPRNQ5BIV9 151 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TMEM255AQ5JRV8 349 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 C6orf136Q5SQH8 315 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PHYHD1Q5SRE7 291 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 BTNL8Q6UX41 500 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 BRD3OSQ6XYD6 125 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 CCDC80Q76M96 950 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ABHD12BQ7Z5M8 362 aaPredicted RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF584Q8IVC4 421 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SLC35F6Q8N357 371 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 KDM8Q8N371 416 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PARP8Q8N3A8 854 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 OR5AK3PQ8NH89 298 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 LINC01006Q8NI28 216 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 PPCDCQ96CD2 204 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TSSK3Q96PN8 268 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 OR7D2Q96RA2 312 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 MRPL57Q9BQC6 102 aaKnown RBP4.12□□□□□ -1.75
CLIP1-207ENST00000536634 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 NMUR2Q9GZQ4 415 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 DPH5Q9H2P9 285 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 REEP4Q9H6H4 257 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 B3GNT2Q9NY97 397 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TAAR3PQ9P1P4 343 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 SEC14L4Q9UDX3 406 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TMED7Q9Y3B3 224 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 INSIG2Q9Y5U4 225 aa4.12□□□□□ -1.75
CLIP1-207ENST00000536634 TRAV40A0A0B4J280 105 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 ISPDA4D126 451 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 C5orf63A6NC05 138 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 PRSS46E5RG02 174 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 ZNF208O43345 1280 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 ATP8B1O43520 1251 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 BCL2L11O43521 198 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 TBX19O60806 448 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 FOXH1O75593 365 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 IGHMP01871 453 aa4.11□□□□□ -1.75
CLIP1-207ENST00000536634 OPN1MWP04001 364 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms