RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 PKP2Q99959 881 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 RBM4BQ9BQ04 359 aaKnown RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 MRI1Q9BV20 369 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 MROQ9BYG7 248 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
PRKDC-207ENST00000536483 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 LRP12Q9Y561 859 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 MPC1Q9Y5U8 109 aa10.37□□□□□ -0.75
PRKDC-207ENST00000536483 PRR32B1ATL7 298 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 LGALS8O00214 317 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 PHYHO14832 338 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 TBX1O43435 398 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 SRSF10O75494 262 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 ALPLP05186 524 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 ACKR3P25106 362 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 NPY4RP50391 375 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 HCCSP53701 268 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 RPS7P62081 194 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 EGR3Q06889 387 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 KCNJ8Q15842 424 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 ESCO2Q56NI9 601 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 ZBTB37Q5TC79 503 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 PRAMEF6Q5VXH4 476 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 TEX36Q5VZQ5 186 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 LPCAT4Q643R3 524 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 KRT77Q7Z794 578 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 GCSAMQ8N6F7 178 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 OR8B12Q8NGG6 310 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 OR8J1Q8NGP2 316 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 EME1Q96AY2 570 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 LYZL4Q96KX0 146 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 CNN2Q99439 309 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 MS4A7Q9GZW8 240 aaPredicted RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 ZMAT3Q9HA38 289 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 CLN6Q9NWW5 311 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 H2AFY2Q9P0M6 372 aaPredicted RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 KAAG1Q9UBP8 84 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 WARS2Q9UGM6 360 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 NUFIP1Q9UHK0 495 aaKnown RBP10.36□□□□□ -0.75
PRKDC-207ENST00000536483 COPS3Q9UNS2 423 aa10.36□□□□□ -0.75
PRKDC-207ENST00000536483 IGHV3OR16-10A0A075B7F0 116 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 KIR2DS1A0A191URI9 304 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 TMEM269A0A1B0GVZ9 245 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 A6NHS1 94 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 RNASE1P07998 156 aaKnown RBP10.35□□□□□ -0.75
PRKDC-207ENST00000536483 HTR1FP30939 366 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 POLR2IP36954 125 aaKnown RBP10.35□□□□□ -0.75
PRKDC-207ENST00000536483 IL5RAQ01344 420 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 DEFA6Q01524 100 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 POU4F2Q12837 409 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 SLC9A3R2Q15599 337 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 FAM201AQ5SY85 155 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF684Q5T5D7 378 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 TREML4Q6UXN2 200 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 NLRC3Q7RTR2 1065 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 BCDIN3DQ7Z5W3 292 aaKnown RBP10.35□□□□□ -0.75
PRKDC-207ENST00000536483 WDR86Q86TI4 376 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 OR1M1Q8NGA1 313 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 RAB40AQ8WXH6 277 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 OR5P3Q8WZ94 311 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 SLC25A28Q96A46 364 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 HRASLS5Q96KN8 279 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 SSBP3Q9BWW4 388 aaPredicted RBP10.35□□□□□ -0.75
PRKDC-207ENST00000536483 SEMA6AQ9H2E6 1030 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 UFSP2Q9NUQ7 469 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 DNAJC27Q9NZQ0 273 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 RHBDD3Q9Y3P4 386 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 N6AMT1Q9Y5N5 214 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 SOX21Q9Y651 276 aaPredicted RBP10.35□□□□□ -0.75
PRKDC-207ENST00000536483 CMYA5Q8N3K9 4069 aa10.35□□□□□ -0.75
PRKDC-207ENST00000536483 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 IGHV3-64DA0A0J9YX35 117 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OOEPA6NGQ2 149 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 IGHV4-38-2P0DP08 117 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 RPS2P15880 293 aaKnown RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 CD80P33681 288 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 RIDAP52758 137 aaKnown RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 IL13RA1P78552 427 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF829Q3KNS6 432 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 WDR25Q64LD2 544 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 ZNF322Q6U7Q0 402 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OR8B3Q8NGG8 313 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OR10Z1Q8NGY1 313 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OR8S1Q8NH09 359 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OR8B2Q96RD0 313 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 IL4I1Q96RQ9 567 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 MICU1Q9BPX6 476 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 FAM192AQ9GZU8 254 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 PBOV1Q9GZY1 135 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 MOB1AQ9H8S9 216 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 C1orf123Q9NWV4 160 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 NDUFA13Q9P0J0 144 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 OR5V1Q9UGF6 321 aa10.34□□□□□ -0.75
PRKDC-207ENST00000536483 IGHV2-70DA0A0C4DH43 119 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ANXA2P2A6NMY6 339 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms