RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 TUBA4BQ9H853 241 aa15.9■□□□□ 0.14
RAB40C-203ENST00000535977 CSAG2Q9Y5P2 127 aa15.9■□□□□ 0.14
RAB40C-203ENST00000535977 ABCA7Q8IZY2 2146 aa15.9■□□□□ 0.14
RAB40C-203ENST00000535977 IGLV3-32A0A0A0MS00 114 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 TMEM269A0A1B0GVZ9 245 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 LIPT2A6NK58 231 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 AMY2AP04746 511 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 LPAR6P43657 344 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 CDX1P47902 265 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 ZNF41P51814 821 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 EMP2P54851 167 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 ADPRHL1Q8NDY3 354 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 SECTM1Q8WVN6 248 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 RNF133Q8WVZ7 376 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 PPP1R14AQ96A00 147 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 MALSU1Q96EH3 234 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 SMIM8Q96KF7 97 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 C20orf24Q9BUV8 137 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 TCAPO15273 167 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 MPZL1O95297 269 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 ARG1P05089 322 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 DCNP07585 359 aaKnown RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 FCGR3AP08637 254 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 NUBP1P53384 320 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 NSUN5P2Q63ZY6 315 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 PAPD4Q6PIY7 484 aaKnown RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 RHOUQ7L0Q8 258 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 RRNAD1Q96FB5 475 aaKnown RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 KCNK15Q9H427 330 aa15.89■□□□□ 0.13
RAB40C-203ENST00000535977 MYOZ1Q9NP98 299 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-203ENST00000535977 LOC107986453A0A1B0GWG9 222 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 LDLRAD4O15165 306 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 ZFAND5O76080 213 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 HOXA6P31267 233 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 POU3F1Q03052 451 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 KLHL24Q6TFL4 600 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 MDGA2Q7Z553 956 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 ANGPTL5Q86XS5 388 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 TGIF2LXQ8IUE1 241 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 KDM8Q8N371 416 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 SOX7Q9BT81 388 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 GAR1Q9NY12 217 aaKnown RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 KLHL13Q9P2N7 655 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 RARRES3Q9UL19 164 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 ALPK2Q86TB3 2170 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 A0A087X0M5 115 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 TRBV11-1A0A0K0K1C0 115 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 A0A1B0GX30 115 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 FBXO24O75426 580 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 FKBP2P26885 142 aaKnown RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 PNLIPRP3Q17RR3 467 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 THEM4Q5T1C6 240 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 OTPQ5XKR4 325 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 TMEM205Q6UW68 189 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 CLDN23Q96B33 292 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 SEH1LQ96EE3 360 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 PRO1933Q9H354 126 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 C19orf25Q9UFG5 118 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 KPTNQ9Y664 436 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 FER1L5A0AVI2 2057 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 IL11P20809 199 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 CXCL12P48061 93 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 FOXF1Q12946 379 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 GAMTQ14353 236 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 SCGB2B2Q4G0G5 96 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 SAT2Q96F10 170 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 C2orf88Q9BSF0 95 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 KLRF1Q9NZS2 232 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 RAB22AQ9UL26 194 aa15.88■□□□□ 0.13
RAB40C-203ENST00000535977 MRPS18BQ9Y676 258 aaKnown RBP15.88■□□□□ 0.13
RAB40C-203ENST00000535977 M0R036 132 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 DOK2O60496 412 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 SCGNO76038 276 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 IFNA17P01571 189 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 MYF5P13349 255 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 HSD11B1P28845 292 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 KIAA0141Q14154 515 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 SURF2Q15527 256 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 ZNF574Q6ZN55 896 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 CPEB2Q7Z5Q1 589 aaKnown RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 MAFAQ8NHW3 353 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 ADAMTS17Q8TE56 1095 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 OR6C1Q96RD1 312 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 OR2S2Q9NQN1 319 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 PARPBPQ9NWS1 579 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 ADAMTS20P59510 1910 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 CACNA1CQ13936 2221 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 MED6O75586 246 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 SCRG1O75711 98 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 HLA-GP17693 338 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 PSMB6P28072 239 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 ID4P47928 161 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 SHBQ15464 509 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 NKPD1Q17RQ9 610 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 C16orf47Q6ZP98 133 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-203ENST00000535977 ZNF627Q7L945 461 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 VDAC3Q9Y277 283 aa15.87■□□□□ 0.13
RAB40C-203ENST00000535977 H7C1Q1 480 aa15.86■□□□□ 0.13
RAB40C-203ENST00000535977 PMP2P02689 132 aa15.86■□□□□ 0.13
RAB40C-203ENST00000535977 ZBTB25P24278 435 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms