RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 REEP6Q96HR9 211 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 NSMCE2Q96MF7 247 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 CCL13Q99616 98 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ABHD6Q9BV23 337 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 FAM234AQ9H0X4 552 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 FN3KQ9H479 309 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 MAGIXQ9H6Y5 334 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 EGLN3Q9H6Z9 239 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 NIPAL2Q9H841 368 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 RAB18Q9NP72 206 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF319Q9P2F9 582 aa9.16□□□□□ -0.94
CLSTN3-206ENST00000535668 A0A1B0GW55 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ARRDC5A6NEK1 342 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 TVP23AA6NH52 213 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 A6NLC8 198 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 CDIPTO14735 213 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 GASTP01350 101 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L2P0CJ85 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L3P0CJ86 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L4P0CJ87 422 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L5P0CJ88 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L6P0CJ89 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L7P0CJ90 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ATP6V1B1P15313 513 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 SAA4P35542 130 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 RPS27P42677 84 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 PRKXP51817 358 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 CRMP1Q14194 572 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ZBTB37Q5TC79 503 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 CALHM1Q8IU99 346 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 C11orf42Q8N5U0 333 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 FAM216BQ8N7L0 139 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 OR9Q1Q8NGQ5 310 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 OR5K1Q8NHB7 308 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ST8SIA4Q92187 359 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 PPP1R14AQ96A00 147 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 GAFA1Q96PS6 74 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 MICU1Q9BPX6 476 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 OR10A2Q9H208 303 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 NDE1Q9NXR1 346 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 RASL12Q9NYN1 266 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ADA2Q9NZK5 511 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 ACTR3BQ9P1U1 418 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 DUX4Q9UBX2 424 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 SF3B6Q9Y3B4 125 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 RHBDD3Q9Y3P4 386 aa9.15□□□□□ -0.94
CLSTN3-206ENST00000535668 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 A0A0U1RQV5 110 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 hCG_1807616A0A1W2PRN6 198 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 FAM90A8PA6NJQ4 464 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 ANXA2P2A6NMY6 339 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 NOS1APO75052 506 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 E2F6O75461 281 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 IFNGP01579 166 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 IGLV3-1P01715 115 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 CSF1P09603 554 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 ACKR3P25106 362 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 GABRA5P31644 462 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 CX3CR1P49238 355 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 ZNF121P58317 390 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 CSNK2BP67870 215 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 DGUOKQ16854 277 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 LCN1P1Q5VSP4 162 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 DEGS2Q6QHC5 323 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 PIGWQ7Z7B1 504 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 CCDC197Q8NCU1 140 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 PAPD5Q8NDF8 572 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 OR4Q3Q8NH05 313 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 OTOSQ8NHW6 89 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 RTL8AQ9BWD3 113 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 TSSK6Q9BXA6 273 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 MUC13Q9H3R2 512 aa9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 SLC25A10Q9UBX3 287 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-206ENST00000535668 IGKV1D-17A0A075B6S4 117 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 TNFRSF11BO00300 401 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 SNX3O60493 162 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 GLCEO94923 617 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 SPARCP09486 303 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 SLC2A1P11166 492 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 HOXB6P17509 224 aaKnown RBP9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 GNALP38405 381 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 DYNLT3P51808 116 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 EGR3Q06889 387 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 TAF13Q15543 124 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 TIGD6Q17RP2 521 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 MICAQ29983 383 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 Q6ZSR3 168 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 Q6ZTK2 550 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 FGFRL1Q8N441 504 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 BOLLQ8N9W6 283 aaKnown RBP9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 WFDC9Q8NEX5 89 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 OR9Q2Q8NGE9 314 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 OR51L1Q8NGJ5 315 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 PPP1R35Q8TAP8 253 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 PIFOQ8TCI5 191 aa9.13□□□□□ -0.95
CLSTN3-206ENST00000535668 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms