RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PAPOLBQ9NRJ5 636 aaKnown RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-215ENST00000533818 SERPINB7O75635 380 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 PSG2P11465 335 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 BMP2P12643 396 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 HTR1DP28221 377 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 GNALP38405 381 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 ARHGDIBP52566 201 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 DLX6P56179 175 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 CDK6Q00534 326 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 TRAP1Q12931 704 aaKnown RBP8.17□□□□□ -1.1
CSDE1-215ENST00000533818 TSPYL5Q86VY4 417 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-215ENST00000533818 RBM45Q8IUH3 476 aaKnown RBP8.17□□□□□ -1.1
CSDE1-215ENST00000533818 FOXRED2Q8IWF2 684 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 MAPKAPK5-AS1Q8N8E1 139 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 SMYD1Q8NB12 490 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 CYB561A3Q8NBI2 242 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 OR1N2Q8NGR9 330 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 PRSS27Q9BQR3 290 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 TLNRD1Q9H1K6 362 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 C1orf21Q9H246 121 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 YY1AP1Q9H869 796 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 PSMC3IPQ9P2W1 217 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-215ENST00000533818 MOB4Q9Y3A3 225 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 LHFPL6Q9Y693 200 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 HSPE1-MOB4S4R3N1 261 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 TNCP24821 2201 aa8.17□□□□□ -1.1
CSDE1-215ENST00000533818 COPEO14579 308 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 SLC22A2O15244 555 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 PIPP12273 146 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF823P16415 610 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 AQP1P29972 269 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 TPTEP56180 551 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ACTA2P62736 377 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ACTG2P63267 376 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ACTC1P68032 377 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ACTA1P68133 377 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF616Q08AN1 781 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 FADDQ13158 208 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 FOXE3Q13461 319 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 GPR50Q13585 617 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 SNAI3Q3KNW1 292 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 GLYATL3Q5SZD4 288 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ASPHD1Q5U4P2 390 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 GPR139Q6DWJ6 353 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ACSM6Q6P461 480 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 SLC35E3Q7Z769 313 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 RPL3LQ92901 407 aaKnown RBP8.16□□□□□ -1.1
CSDE1-215ENST00000533818 SDSLQ96GA7 329 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ZBTB18Q99592 522 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 TMED9Q9BVK6 235 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 SLAMF8Q9P0V8 285 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF222Q9UK12 451 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 A4GNTQ9UNA3 340 aa8.16□□□□□ -1.1
CSDE1-215ENST00000533818 VPS13DQ5THJ4 4388 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 MAGEA13PA6NCF6 341 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 CLIC1O00299 241 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 XKRYO14609 159 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 HSPA12AO43301 675 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 AHCYL1O43865 530 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 SLC16A7O60669 478 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 KHDRBS3O75525 346 aaKnown RBP8.15□□□□□ -1.1
CSDE1-215ENST00000533818 OR5F1O95221 314 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 ELANEP08246 267 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 ZNF728P0DKX0 622 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 LBPP18428 481 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 GLRA1P23415 457 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 DDOSTP39656 456 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 PRR20EP86478 221 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 PRR20CP86479 221 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 PRR20DP86480 221 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 PRR20BP86481 221 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 PRR20AP86496 221 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.1
CSDE1-215ENST00000533818 KCNMB1Q16558 191 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 MEP1BQ16820 701 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 GCNT6Q5T4J0 391 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 NANOGP8Q6NSW7 305 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 BLOC1S3Q6QNY0 202 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 RNF152Q8N8N0 203 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 FAM46AQ96IP4 442 aaKnown RBP8.15□□□□□ -1.1
CSDE1-215ENST00000533818 WDR55Q9H6Y2 383 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-215ENST00000533818 DPM3Q9P2X0 92 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 HHLA2Q9UM44 414 aa8.15□□□□□ -1.1
CSDE1-215ENST00000533818 HSPG2P98160 4391 aa8.15□□□□□ -1.11
CSDE1-215ENST00000533818 IGHV2-26A0A0B4J1V2 119 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 MEX3AA1L020 520 aaKnown RBP8.14□□□□□ -1.11
CSDE1-215ENST00000533818 PRSS37A4D1T9 235 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 M0R135 149 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 IGHG2P01859 326 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 RBP4P02753 201 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 IL6P05231 212 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 SPARCP09486 303 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 RBM34P42696 430 aaKnown RBP8.14□□□□□ -1.11
CSDE1-215ENST00000533818 CENPAP49450 140 aa8.14□□□□□ -1.11
CSDE1-215ENST00000533818 GNG11P61952 73 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms