RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 FAM183AA6NL82 134 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 LINC00473A8K010 186 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 H7C417 338 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 OVOL3O00110 214 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 RER1O15258 196 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 SYNGR3O43761 229 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 CD8AP01732 235 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 ERCC1P07992 297 aaPredicted RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 SNRNP70P08621 437 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 ZNF20P17024 532 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 CCNOP22674 350 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 GGT2P36268 569 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 NUDT6P53370 316 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 UCP2P55851 309 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 CDC42P60953 191 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 MEP1BQ16820 701 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 PCK2Q16822 640 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 KLHL12Q53G59 568 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 TMEM236Q5W0B7 351 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 C12orf73Q69YU5 71 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 C11orf71Q6IPW1 123 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 SLC18B1Q6NT16 456 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 PRSS57Q6UWY2 283 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 RHOUQ7L0Q8 258 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 PEG10Q86TG7 708 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 GID4Q8IVV7 300 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 CBR4Q8N4T8 237 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 OR1F12Q8NHA8 337 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 TMEM163Q8TC26 289 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 DVL3Q92997 716 aaPredicted RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 MRPL24Q96A35 216 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 RDH12Q96NR8 316 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 INTS14Q96SY0 518 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 PITX2Q99697 317 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 ATF6BQ99941 703 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 OR51V1Q9H2C8 321 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 RIBC2Q9H4K1 309 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 DCLRE1BQ9H816 532 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 MED20Q9H944 212 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 HINT3Q9NQE9 182 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 MRPL22Q9NWU5 206 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 HEATR1Q9H583 2144 aaKnown RBP6.53□□□□□ -1.36
CASP4-212ENST00000533730 APCP25054 2843 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 FBN2P35556 2912 aa6.53□□□□□ -1.36
CASP4-212ENST00000533730 DSCAMO60469 2012 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ERICH4A6NGS2 130 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 TVP23AA6NH52 213 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 M0R233 179 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ZNF593O00488 134 aaPredicted RBP6.52□□□□□ -1.37
CASP4-212ENST00000533730 RRHO14718 337 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OGG1O15527 345 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 GPRIN2O60269 458 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 APOC1P02654 83 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 GYPBP06028 91 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 LCKP06239 509 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 CLUP10909 449 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 CCL2P13500 99 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ANPEPP15144 967 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ZNF250P15622 560 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 SLC2A5P22732 501 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 PTH2RP49190 550 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 PPOXP50336 477 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 BMXP51813 675 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 CAPZA1P52907 286 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ATP5J2P56134 94 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 KLF3P57682 345 aaPredicted RBP6.52□□□□□ -1.37
CASP4-212ENST00000533730 TMED1Q13445 227 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 APOFQ13790 326 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 RCN1Q15293 331 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ZNF718Q3SXZ3 478 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 LINC01590Q5TEZ4 76 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 NXNL2Q5VZ03 156 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 RAB12Q6IQ22 244 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 SPNS3Q6ZMD2 512 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 PACRGLQ8N7B6 248 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OR51L1Q8NGJ5 315 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OR5L1Q8NGL2 311 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OR8J1Q8NGP2 316 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OR1J1Q8NGS3 322 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 OR6N2Q8NGY6 317 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 SYNPRQ8TBG9 265 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 TRUB1Q8WWH5 349 aaKnown RBP6.52□□□□□ -1.37
CASP4-212ENST00000533730 SPTSSAQ969W0 71 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 APOBEC3DQ96AK3 386 aaPredicted RBP6.52□□□□□ -1.37
CASP4-212ENST00000533730 C4orf45Q96LM5 186 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 HCAR1Q9BXC0 346 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 DYNLRB1Q9NP97 96 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 DDX28Q9NUL7 540 aaKnown RBP6.52□□□□□ -1.37
CASP4-212ENST00000533730 IMPAD1Q9NX62 359 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 SLCO1C1Q9NYB5 712 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 GRIP1Q9Y3R0 1128 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 TMEM14AQ9Y6G1 99 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 CEPT1Q9Y6K0 416 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 NAV2Q8IVL1 2488 aa6.52□□□□□ -1.37
CASP4-212ENST00000533730 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
CASP4-212ENST00000533730 ANKRD17O75179 2603 aaKnown RBP6.51□□□□□ -1.37
CASP4-212ENST00000533730 IGLV3-9A0A075B6K5 115 aa6.51□□□□□ -1.37
CASP4-212ENST00000533730 A0A1W2PPW3 197 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms