RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 FIGNL2A6NMB9 653 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PRRG2O14669 202 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CXCL13O43927 109 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NXPH3O95157 252 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RAB5AP20339 215 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 ASTLQ6HA08 431 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PRR27Q6MZM9 219 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 MAMSTRQ6ZN01 415 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 UBALD2Q8IYN6 164 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SPEM1Q8N4L4 309 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR5B3Q8NH48 314 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PATE1Q8WXA2 126 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RDH5Q92781 318 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 WDR89Q96FK6 387 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SMIM7Q9BQ49 75 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NDFIP1Q9BT67 221 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PARD6AQ9NPB6 346 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 ANKRD10Q9NXR5 420 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 KIAA1456Q9P272 454 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SIRPB1O00241 398 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR2J2O76002 312 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CST4P01036 141 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CST2P09228 141 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 FBP1P09467 338 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PGA3P0DJD8 388 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NME1P15531 152 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RPA2P15927 270 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 FUT3P21217 361 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CRYBB2P43320 205 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NOVA1P51513 510 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RAE1P78406 368 aaKnown RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 FOXF1Q12946 379 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 HES1Q14469 280 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 RAB35Q15286 201 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 NCR3LG1Q68D85 454 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 LCN15Q6UWW0 184 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 DRAM2Q6UX65 266 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OR5AS1Q8N127 324 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 M1APQ8TC57 530 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PHYHIPLQ96FC7 376 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 DERL3Q96Q80 235 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 PRRX2Q99811 253 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 COMMD5Q9GZQ3 224 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 OPN3Q9H1Y3 402 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-236ENST00000533667 CRLF2Q9HC73 371 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 SIRT5Q9NXA8 310 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
CTNND1-236ENST00000533667 LINC00862A6NCI5 91 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 AP4M1O00189 453 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 CHEK1O14757 476 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PTP4A3O75365 173 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OPRM1P35372 400 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PPIAP62937 165 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TMEM196Q5HYL7 178 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PRSS36Q5K4E3 855 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 LEMD1Q68G75 181 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 FAAP20Q6NZ36 180 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SLC25A26Q70HW3 274 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 MSRB3Q8IXL7 192 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ZFP62Q8NB50 900 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 GPR32P1Q8NGA4 272 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 GINS3Q9BRX5 216 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ZDHHC11Q9H8X9 412 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 KLK11Q9UBX7 282 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 MTFP1Q9UDX5 166 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 LRP12Q9Y561 859 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 METTL12A8MUP2 240 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 DVL1O14640 695 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PPM1DO15297 605 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 IGHA2P01877 340 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 DVL1P1P54792 670 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 FABP9Q0Z7S8 132 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TRA2AQ13595 282 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RPL7L1Q6DKI1 246 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OR10X1Q8NGY0 326 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 CCL4L1Q8NHW4 92 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PELI1Q96FA3 418 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 RALYQ9UKM9 306 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 NUMA1Q14980 2115 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 G3V3Q6 166 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TCF21O43680 179 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 IGHV3-9P01782 118 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SULT1A3P0DMM9 295 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SULT1A4P0DMN0 295 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OR2B8PP59922 312 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 PLA1AQ53H76 456 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 TMEM123Q8N131 208 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 STPG2Q8N412 459 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SIGLECL1Q8N7X8 197 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ATOH1Q92858 354 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 GALMQ96C23 342 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 OCIAD1Q9NX40 245 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 BET1LQ9NYM9 111 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 YTHDF2Q9Y5A9 579 aaKnown RBP6.3□□□□□ -1.4
CTNND1-236ENST00000533667 ARAP2Q8WZ64 1704 aa6.3□□□□□ -1.4
CTNND1-236ENST00000533667 SLX4Q8IY92 1834 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms