RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 IL2RAP01589 272 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 DBHP09172 617 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 FAHP16930 419 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 CD34P28906 385 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 PTGFRP43088 359 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 RPS27AP62979 156 aaKnown RBP16.89■□□□□ 0.29
UBXN1-215ENST00000533476 FGL1Q08830 312 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 ACTBL2Q562R1 376 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
UBXN1-215ENST00000533476 SFRP5Q5T4F7 317 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 LYG2Q86SG7 212 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 SLC51BQ86UW2 128 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 DTX1Q86Y01 620 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 TMEM38BQ9NVV0 291 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 PIGLQ9Y2B2 252 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 SESN1Q9Y6P5 492 aa16.89■□□□□ 0.29
UBXN1-215ENST00000533476 LNP1A1A4G5 178 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 C9orf172C9J069 976 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 SGCEO43556 437 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 IFNA6P05013 189 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 SP9P0CG40 484 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 NTF4P34130 210 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 TMEM50BP56557 158 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 UBE2V2Q15819 145 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 CCDC157Q569K6 752 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 DRAM2Q6UX65 266 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 OR4K15Q8NH41 348 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 OR10D3Q8NH80 312 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 ZNF775Q96BV0 537 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-215ENST00000533476 CRLF2Q9HC73 371 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.88■□□□□ 0.29
UBXN1-215ENST00000533476 SPEF1Q9Y4P9 236 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 PCDHGA1Q9Y5H4 931 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 SDK2Q58EX2 2172 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 LOC105371267A0A1B0GV96 52 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 OR2AT4A6NND4 320 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 DHRS7CA6NNS2 312 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 SYNGR3O43761 229 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 TRAPPC6AO75865 159 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 HLA-GP17693 338 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 POU3F2P20265 443 aaPredicted RBP16.88■□□□□ 0.29
UBXN1-215ENST00000533476 CNR1P21554 472 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 AAED1Q7RTV5 226 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 OCSTAMPQ9BR26 566 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 MFFQ9GZY8 342 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 NOP16Q9Y3C1 178 aaKnown RBP16.88■□□□□ 0.29
UBXN1-215ENST00000533476 KCNMB2Q9Y691 235 aa16.88■□□□□ 0.29
UBXN1-215ENST00000533476 PINLYPA6NC86 204 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 FOXI3A8MTJ6 420 aaPredicted RBP16.87■□□□□ 0.29
UBXN1-215ENST00000533476 RAD51DO75771 328 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 PMP2P02689 132 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 GDF1P27539 372 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 MPGP29372 298 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 CBX5P45973 191 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 STARP49675 285 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 SORDQ00796 357 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 SCRN3Q0VDG4 424 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 PPP1R1AQ13522 171 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 SNAI3Q3KNW1 292 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 VAX1Q5SQQ9 334 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 SLC16A14Q7RTX9 510 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 NPRL2Q8WTW4 380 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 ROBO4Q8WZ75 1007 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 HAS2Q92819 552 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 CCDC120Q96HB5 630 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 ARHGAP5-AS1Q96IT6 56 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 PFDN2Q9UHV9 154 aa16.87■□□□□ 0.29
UBXN1-215ENST00000533476 LOC100509620A0A075B734 347 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 TRAV14DV4A0A0A6YYC5 116 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 A0A0D9SG52 128 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 STMND1H3BQB6 276 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 GFRA1P56159 465 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 CLDN15P56746 228 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 FOXO1Q12778 655 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 MICBQ29980 383 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 RIPPLY2Q5TAB7 128 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 OVCH2Q7RTZ1 564 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 C1QL2Q7Z5L3 287 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 HOGA1Q86XE5 327 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 EIF4E3Q8N5X7 224 aaKnown RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 OR5D18Q8NGL1 313 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 OR5M9Q8NGP3 310 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 OR1F12Q8NHA8 337 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 SLC39A7Q92504 469 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 SGK3Q96BR1 496 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 THOC3Q96J01 351 aaKnown RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 BOKQ9UMX3 212 aaPredicted RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 C9orf170A2RU37 121 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 KRBOX1C9JBD0 128 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 LIPCP11150 499 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 SLC25A4P12235 298 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 FCGR2AP12318 317 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 MGMTP16455 207 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 KRTAP27-1Q3LI81 207 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 ZNF660Q6AZW8 331 aaPredicted RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 LIN54Q6MZP7 749 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 JMJD6Q6NYC1 403 aaPredicted RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 HSD17B13Q7Z5P4 300 aaPredicted RBP16.86■□□□□ 0.29
UBXN1-215ENST00000533476 ARRDC1Q8N5I2 433 aa16.86■□□□□ 0.29
UBXN1-215ENST00000533476 OR51T1Q8NGJ9 327 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms