RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PRIMA1Q86XR5 153 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ZDHHC23Q8IYP9 409 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 GCSAMQ8N6F7 178 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 PIGCQ92535 297 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 RTL8AQ9BWD3 113 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 RNPEPL1Q9HAU8 725 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 ACOXLQ9NUZ1 547 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 PCDHB10Q9UN67 800 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 POLR3KQ9Y2Y1 108 aaPredicted RBP17.13■□□□□ 0.33
CCS-208ENST00000533244 V9GYS6 101 aa17.13■□□□□ 0.33
CCS-208ENST00000533244 DAPL1A0PJW8 107 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 A6NLC8 198 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 TMEM210A6NLX4 147 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 DHRS7CA6NNS2 312 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 MTRF1O75570 445 aaKnown RBP17.12■□□□□ 0.33
CCS-208ENST00000533244 LHBP01229 141 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 WNT2P09544 360 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 FAM157CP0CG43 387 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 THBS2P35442 1172 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 CFHR2P36980 270 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 HOXA4Q00056 320 aaPredicted RBP17.12■□□□□ 0.33
CCS-208ENST00000533244 RAB40BQ12829 278 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 FAM220AQ7Z4H9 259 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 OR14K1Q8NGZ2 314 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 ZNF649Q9BS31 505 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 BEX2Q9BXY8 128 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 AMBNQ9NP70 447 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 GNG8Q9UK08 70 aa17.12■□□□□ 0.33
CCS-208ENST00000533244 PPIAL4CA0A0B4J2A2 164 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 ERICH4A6NGS2 130 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 P2RY10O00398 339 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 CLIC3O95833 236 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 FAHP16930 419 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
CCS-208ENST00000533244 SEC61A1P61619 476 aaKnown RBP17.11■□□□□ 0.33
CCS-208ENST00000533244 CSNK2BP67870 215 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 WDR38Q5JTN6 314 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 TMEM42Q69YG0 159 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 FDX2Q6P4F2 183 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 WDR82Q6UXN9 313 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 IL17RELQ6ZVW7 336 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 PRSS35Q8N3Z0 413 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 DHRSXQ8N5I4 330 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 NKX1-2Q9UD57 310 aaPredicted RBP17.11■□□□□ 0.33
CCS-208ENST00000533244 ENPP5Q9UJA9 477 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 PIGLQ9Y2B2 252 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 MYRFQ9Y2G1 1151 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
CCS-208ENST00000533244 RPL36Q9Y3U8 105 aaKnown RBP17.11■□□□□ 0.33
CCS-208ENST00000533244 MXRA5Q9NR99 2828 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 KIAA1324LA8MWY0 1029 aaPredicted RBP17.1■□□□□ 0.33
CCS-208ENST00000533244 LGALS8O00214 317 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 FOXH1O75593 365 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 FADS2O95864 444 aaKnown RBP17.1■□□□□ 0.33
CCS-208ENST00000533244 HNF1AP20823 631 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 SMN1Q16637 294 aaKnown RBP17.1■□□□□ 0.33
CCS-208ENST00000533244 CEACAM21Q3KPI0 293 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 DCDC5Q6ZRR9 648 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 DOK3Q7L591 496 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 THAP5Q7Z6K1 395 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 EGFL6Q8IUX8 553 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 C19orf18Q8NEA5 215 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 CYGBQ8WWM9 190 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 INPP5EQ9NRR6 644 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 MIOXQ9UGB7 285 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 CUBNO60494 3623 aa17.1■□□□□ 0.33
CCS-208ENST00000533244 TNFRSF13BO14836 293 aaPredicted RBP17.09■□□□□ 0.33
CCS-208ENST00000533244 RPS2P15880 293 aaKnown RBP17.09■□□□□ 0.33
CCS-208ENST00000533244 EGR1P18146 543 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 CD80P33681 288 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 KIR3DL2P43630 455 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 OR12D2P58182 307 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 ACTA2P62736 377 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 ACTG2P63267 376 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 LCN2P80188 198 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 IL18R1Q13478 541 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 GALEQ14376 348 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 TEX36Q5VZQ5 186 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 OR52I1Q8NGK6 324 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 OR2G2Q8NGZ5 317 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 RNF170Q96K19 258 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 ADI1Q9BV57 179 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 JAM3Q9BX67 310 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 METTL17Q9H7H0 456 aaPredicted RBP17.09■□□□□ 0.33
CCS-208ENST00000533244 ARHGAP32A7KAX9 2087 aa17.09■□□□□ 0.33
CCS-208ENST00000533244 hCG_1807616A0A1W2PRN6 198 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 OOEPA6NGQ2 149 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 H0YAE9 185 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 CDIPTO14735 213 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 GATA3P23771 443 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 PSMB10P40306 273 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 SLC34A1Q06495 639 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 KLHL22Q53GT1 634 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 SYS1Q8N2H4 156 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 SETD9Q8NE22 299 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 CCDC54Q8NEL0 328 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 OR5A2Q8NGI9 324 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 OR10Z1Q8NGY1 313 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 CNIH3Q8TBE1 160 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 LRRC29Q8WV35 223 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms