RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ADAT1Q9BUB4 502 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 CXXC4Q9H2H0 198 aa9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 DLL4Q9NR61 685 aa9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 ZNF275Q9NSD4 429 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 C14orf119Q9NWQ9 140 aa9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 SIRT4Q9Y6E7 314 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 SETXQ7Z333 2677 aaKnown RBP9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 PDZD2O15018 2839 aa9.54□□□□□ -0.88
TRAPPC4-211ENST00000533012 DSCAMO60469 2012 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 IGHV1-69-2A0A0G2JMI3 117 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 A6NIN4 97 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 PLPP2O43688 288 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CDC14BO60729 498 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 NCR1O76036 304 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 NRASP01111 189 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CSF3P09919 207 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 FAHP16930 419 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 COL8A2P25067 703 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CALRP27797 417 aaKnown RBP9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CRYBB2P43320 205 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 MAP2K4P45985 399 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 PDLIM4P50479 330 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 EMX1Q04741 257 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 PRDX4Q13162 271 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CARTPTQ16568 116 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CLEC12BQ2HXU8 276 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 HFEQ30201 348 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CEACAM21Q3KPI0 293 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 Q5PR19 223 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CLVS2Q5SYC1 327 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ZDHHC23Q8IYP9 409 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ZNF525Q8N782 197 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ZFP41Q8N8Y5 198 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 OR13F1Q8NGS4 319 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 RPS4Y2Q8TD47 263 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 GPR148Q8TDV2 347 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ITLN1Q8WWA0 313 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 OR5P3Q8WZ94 311 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 CCL17Q92583 94 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ERGIC1Q969X5 290 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 FGGYQ96C11 551 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ISOC1Q96CN7 298 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 RNF170Q96K19 258 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 MEGF10Q96KG7 1140 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 ISYNA1Q9NPH2 558 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 DHDHQ9UQ10 334 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 LSM2Q9Y333 95 aaKnown RBP9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 SPG11Q96JI7 2443 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
TRAPPC4-211ENST00000533012 PNMA8CA0A1B0GUJ8 204 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 ANKRD61A6NGH8 418 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 LYNX1G3V0Z9 82 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 NDUFS8O00217 210 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 CD1AP06126 327 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 GRPP07492 148 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 HSMCR30P0CW71 290 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 LYNX1P0DP58 116 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 ZNF20P17024 532 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 CD200P41217 278 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 TMEM33P57088 247 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 MAB21L1Q13394 359 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 GPR50Q13585 617 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 TBCEQ15813 527 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 SPRNQ5BIV9 151 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 YIF1BQ5BJH7 314 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 CEP78Q5JTW2 689 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 PLCXD3Q63HM9 321 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 TMEM42Q69YG0 159 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 SERPINA12Q8IW75 414 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR5A2Q8NGI9 324 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR51A4Q8NGJ6 313 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR10AC1Q8NH08 325 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 PP6455Q8WZ26 134 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 FAM168AQ92567 244 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 UFD1Q92890 307 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 DVL3Q92997 716 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 MUL1Q969V5 352 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 MGLLQ99685 303 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 RTL8AQ9BWD3 113 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 PPP1R3EQ9H7J1 279 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 CHODLQ9H9P2 273 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 GCM1Q9NP62 436 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 ACOT13Q9NPJ3 140 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 SLC7A11Q9UPY5 501 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 PPP1R3CQ9UQK1 317 aa9.52□□□□□ -0.89
TRAPPC4-211ENST00000533012 POLQO75417 2590 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 IGHV3-64DA0A0J9YX35 117 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 LOC100289279A0A1B0GTE1 492 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 LRRC30A6NM36 301 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 IFNL4K9M1U5 179 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 LMX1BO60663 402 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 GATBO75879 557 aaKnown RBP9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 PTBP3O95758 552 aaKnown RBP9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 CD2P06729 351 aa9.51□□□□□ -0.89
TRAPPC4-211ENST00000533012 OCM2P0CE71 109 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms