RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GPR84Q9NQS5 396 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 R4GMQ9 66 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF816-ZNF321PA0A0X1KG74 233 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 LGALS8O00214 317 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 ENTPD6O75354 484 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 TTRP02766 147 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 KRT8P05787 483 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 CD80P33681 288 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
CPSF1-210ENST00000532935 CSNK2BP67870 215 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF154Q13106 437 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 KCNJ8Q15842 424 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 SLC25A30Q5SVS4 291 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-210ENST00000532935 LYPD2Q6UXB3 125 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 NLRC3Q7RTR2 1065 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 OR5P3Q8WZ94 311 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 ITFG2Q969R8 447 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 FAM71F1Q96KD3 344 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-210ENST00000532935 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 NR1H4Q96RI1 486 aaPredicted RBP12.84□□□□□ -0.35
CPSF1-210ENST00000532935 RTL8AQ9BWD3 113 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 C7orf69Q9H7B7 122 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 OR5V1Q9UGF6 321 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 METRNQ9UJH8 293 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPSF1-210ENST00000532935 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
CPSF1-210ENST00000532935 TRAV38-1A0A0B4J264 116 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 OOEPA6NGQ2 149 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 LHBP01229 141 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 ZNF12P17014 697 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 MTNR1AP48039 350 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 PITPNBP48739 271 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 AQP4P55087 323 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 GNB2P62879 340 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 OCLNQ16625 522 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 MEDAGQ5VYS4 303 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 KRT74Q7RTS7 529 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 C1QL2Q7Z5L3 287 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 ZDHHC23Q8IYP9 409 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 YIPF7Q8N8F6 280 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 LRRC29Q8WV35 223 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 HPSE2Q8WWQ2 592 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 FGF23Q9GZV9 251 aaPredicted RBP12.83□□□□□ -0.36
CPSF1-210ENST00000532935 TLNRD1Q9H1K6 362 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 TRIM36Q9NQ86 728 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 OPN4Q9UHM6 478 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 INSIG2Q9Y5U4 225 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 SNX5Q9Y5X3 404 aa12.83□□□□□ -0.36
CPSF1-210ENST00000532935 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 TMEM210A6NLX4 147 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 SULT1C4O75897 302 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 DHRS3O75911 302 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
CPSF1-210ENST00000532935 EGR1P18146 543 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 ADRA2CP18825 462 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 PSMB10P40306 273 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 ZNF85Q03923 595 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 SCGB2A2Q13296 93 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 MED21Q13503 144 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 ZBTB37Q5TC79 503 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 LIPNQ5VXI9 398 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 WDR82Q6UXN9 313 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 THAP5Q7Z6K1 395 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 RNFT2Q96EX2 444 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 RNF170Q96K19 258 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 CLN8Q9UBY8 286 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 PIGLQ9Y2B2 252 aa12.82□□□□□ -0.36
CPSF1-210ENST00000532935 LOC100130705A0A1B0GUX0 176 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 CDIPTO14735 213 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 TNFRSF13BO14836 293 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-210ENST00000532935 NDUFA2O43678 99 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 MTRF1O75570 445 aaKnown RBP12.81□□□□□ -0.36
CPSF1-210ENST00000532935 FAHP16930 419 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 GABRB1P18505 474 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 CFHR2P36980 270 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 PAX2Q02962 417 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 CEACAM21Q3KPI0 293 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 FAM76BQ5HYJ3 339 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 TEX36Q5VZQ5 186 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
CPSF1-210ENST00000532935 ZNF841Q6ZN19 808 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 FAM90A1Q86YD7 464 aa12.81□□□□□ -0.36
CPSF1-210ENST00000532935 NANPQ8TBE9 248 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms