RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CRLF1O75462 422 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 LHBP01229 141 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 PPIAL4FP0DN26 164 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 IRF2P14316 349 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 CCL1P22362 96 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 THBS2P35442 1172 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 WDR38Q5JTN6 314 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 FDX2Q6P4F2 183 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 FAM220AQ7Z4H9 259 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 SPICQ8N5J4 248 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 MICU1Q9BPX6 476 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 VCXQ9H320 206 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 PATZ1Q9HBE1 687 aaKnown RBP16.66■□□□□ 0.26
CPSF1-209ENST00000532725 INPP5EQ9NRR6 644 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 C1orf123Q9NWV4 160 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 ERVK13-1Q9NX77 482 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 KCNS2Q9ULS6 477 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 PPIAL4AQ9Y536 164 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 NAV3Q8IVL0 2385 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 J3QLW9 94 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 MSMBP08118 114 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 FAHP16930 419 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF19P17023 458 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 KIR3DL2P43630 455 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 DVL1P1P54792 670 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-209ENST00000532725 HOXA4Q00056 320 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF154Q13106 437 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF771Q7L3S4 317 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-209ENST00000532725 DOK3Q7L591 496 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 THAP5Q7Z6K1 395 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ZDHHC23Q8IYP9 409 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 MUC20Q8N307 709 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-209ENST00000532725 KLHL36Q8N4N3 616 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 OR2G2Q8NGZ5 317 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 HPSE2Q8WWQ2 592 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 PELI1Q96FA3 418 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 RNF170Q96K19 258 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ALG8Q9BVK2 526 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 JAM3Q9BX67 310 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 TLNRD1Q9H1K6 362 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 FRRS1LQ9P0K9 344 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 ENPP5Q9UJA9 477 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 PCDHB10Q9UN67 800 aa16.65■□□□□ 0.26
CPSF1-209ENST00000532725 DHRS7CA6NNS2 312 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 H0YJX3 145 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 PLPP2O43688 288 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 WNT2P09544 360 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 CFHR2P36980 270 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 NANOS3P60323 173 aaKnown RBP16.64■□□□□ 0.25
CPSF1-209ENST00000532725 ACTA2P62736 377 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 ACTG2P63267 376 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 ODF4Q2M2E3 257 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 CEACAM21Q3KPI0 293 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 ZNF404Q494X3 552 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 TMEM42Q69YG0 159 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 LAIR2Q6ISS4 152 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 RDH10Q8IZV5 341 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 SYS1Q8N2H4 156 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 FBLIM1Q8WUP2 373 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 TMEM186Q96B77 213 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 C4orf36Q96KX1 117 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 HIST1H2AAQ96QV6 131 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 MYCBPQ99417 103 aaPredicted RBP16.64■□□□□ 0.25
CPSF1-209ENST00000532725 TMEM246Q9BRR3 403 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 RTL8AQ9BWD3 113 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 ISG20L2Q9H9L3 353 aaKnown RBP16.64■□□□□ 0.25
CPSF1-209ENST00000532725 LPAR2Q9HBW0 351 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 JMJD1CQ15652 2540 aa16.64■□□□□ 0.25
CPSF1-209ENST00000532725 SVEP1Q4LDE5 3571 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 A6NLC8 198 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 TMEM210A6NLX4 147 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 CEACAM18A8MTB9 384 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 F5H0A9 414 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-209ENST00000532725 TNFRSF13BO14836 293 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-209ENST00000532725 NRASP01111 189 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 LIMS3P0CW19 117 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 LIMS4P0CW20 117 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 DCKP27707 260 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 CCR9P51686 369 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 CSNK2BP67870 215 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 DMRTC1Q5HYR2 192 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 CEP78Q5JTW2 689 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 WDR82Q6UXN9 313 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 MOB3CQ70IA8 216 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 C8orf59Q8N0T1 100 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-209ENST00000532725 GCSAMQ8N6F7 178 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 C19orf18Q8NEA5 215 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 OR5A2Q8NGI9 324 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 OR51F2Q8NH61 342 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 MRPL48Q96GC5 212 aaKnown RBP16.63■□□□□ 0.25
CPSF1-209ENST00000532725 POM121Q96HA1 1249 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 METTL17Q9H7H0 456 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-209ENST00000532725 HIF1ANQ9NWT6 349 aa16.63■□□□□ 0.25
CPSF1-209ENST00000532725 A0A1B0GVI7 797 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 A6NIN4 97 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 H0YHG0 523 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 CDIPTO14735 213 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 SYT7O43581 403 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 HTR1AP08908 422 aa16.62■□□□□ 0.25
CPSF1-209ENST00000532725 CPT2P23786 658 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms