RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HPNP05981 417 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 ZNF32P17041 273 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 ADRA2CP18825 462 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
PTPRK-221ENST00000532331 DRAM2Q6UX65 266 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 Q6ZRG5 221 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 PXT1Q8NFP0 134 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 K7EQM0 130 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 CCSO14618 274 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 CRYZL1O95825 349 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 TBPP20226 339 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 RPL35P42766 123 aaKnown RBP10.08□□□□□ -0.8
PTPRK-221ENST00000532331 PSMB3P49720 205 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 TMPRSS11FQ6ZWK6 438 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 RHOUQ7L0Q8 258 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 CDC20BQ86Y33 519 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 CYSLTR2Q9NS75 346 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 NTMQ9P121 344 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 TRAPPC4Q9Y296 219 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 LOC285556D6RIA3 1793 aa10.08□□□□□ -0.8
PTPRK-221ENST00000532331 A0A1B0GUH1 482 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 RPS10-NUDT3A0A1W2PQS6 291 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 TMEM127O75204 238 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 GNG3P63215 75 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 IL34Q6ZMJ4 242 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 ZNF225Q9UK10 706 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 FOCADQ5VW36 1801 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 M0QZ24 198 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 CSF2RBP32927 897 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 THBS4P35443 961 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 GABRA4P48169 554 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 OR10A3P58181 314 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 PMP22Q01453 160 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 SSX2Q16385 188 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 SOHLH1Q5JUK2 328 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 DLL4Q9NR61 685 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 KRBOX1C9JBD0 128 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 NUPL2O15504 423 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 GIPP09681 153 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 KIAA0040Q15053 153 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 TESK1Q15569 626 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 CBLN3Q6UW01 205 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 VSTM2LQ96N03 204 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 OCEL1Q9H607 264 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 ST3GAL6Q9Y274 331 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 HABP2Q14520 560 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 FAM74A1Q5RGS3 127 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 MRM1Q6IN84 353 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 Q8IYB0 196 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 OSR2Q8N2R0 312 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 OTOSQ8NHW6 89 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 SLC6A13Q9NSD5 602 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 IL20Q9NYY1 176 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 PURGQ9UJV8 347 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 PCYT1BQ9Y5K3 369 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 RBBP6Q7Z6E9 1792 aaKnown RBP10.07□□□□□ -0.8
PTPRK-221ENST00000532331 CLEC3BP05452 202 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 ATF1P18846 271 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 WNT3P56703 355 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 ZNF774Q6NX45 483 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 TMUB2Q71RG4 321 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 NUDCD2Q8WVJ2 157 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 FOXJ2Q9P0K8 574 aa10.07□□□□□ -0.8
PTPRK-221ENST00000532331 SMLR1H3BR10 107 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 SDCBPO00560 298 aaPredicted RBP10.06□□□□□ -0.8
PTPRK-221ENST00000532331 PCMT1P22061 227 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 NPBWR1P48145 328 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 OR10R2Q8NGX6 335 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 OR2G3Q8NGZ4 309 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 LILRB4Q8NHJ6 448 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 OR8B4Q96RC9 309 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 PLA2G12AQ9BZM1 189 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 TAF9BQ9HBM6 251 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 FAM221AA4D161 298 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 TRAPPC2P0DI81 140 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 TRAPPC2BP0DI82 140 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 MGMTP16455 207 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 CA6P23280 308 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 EVX1P49640 407 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 SLC25A1P53007 311 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 C12orf73Q69YU5 71 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 SLC7A6Q92536 515 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 FOXJ3Q9UPW0 622 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 TRAV1-2A0A0B4J238 106 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 YIF1AO95070 293 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 FMODQ06828 376 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 Q6ZNX1 250 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 DYNC2LI1Q8TCX1 351 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 YIPF6Q96EC8 236 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 ZNF385DQ9H6B1 395 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 SIGLEC7Q9Y286 467 aa10.06□□□□□ -0.8
PTPRK-221ENST00000532331 ASPDHA6ND91 283 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms