RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 CLVS2Q5SYC1 327 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 SERPINA12Q8IW75 414 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 CELF2-AS1Q8N7Q2 184 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 OR13C3Q8NGS6 347 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 OR10AC1Q8NH08 325 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 TSEN15Q8WW01 171 aaKnown RBP10.66□□□□□ -0.7
COPB1-208ENST00000532088 CHST5Q9GZS9 411 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 MYEF2Q9P2K5 600 aaKnown RBP10.66□□□□□ -0.7
COPB1-208ENST00000532088 FZR1Q9UM11 496 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 PIGLQ9Y2B2 252 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 PMF1-BGLAPU3KQ54 211 aa10.66□□□□□ -0.7
COPB1-208ENST00000532088 ABCA4P78363 2273 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
COPB1-208ENST00000532088 TRBV5-7A0A0A0MS05 114 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 PNMA8CA0A1B0GUJ8 204 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 TRDV1A0A1B0GX56 115 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ZNF879B4DU55 563 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 H7C417 338 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 OVOL3O00110 214 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 TMPRSS2O15393 492 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 GPX5O75715 221 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 SOD3P08294 240 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ZNF20P17024 532 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 FSTP19883 344 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 GNALP38405 381 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ZNF81P51508 661 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ID3Q02535 119 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 PCGF3Q3KNV8 242 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 TIMM50Q3ZCQ8 353 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 ACSM3Q53FZ2 586 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 GDPGP1Q6ZNW5 385 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 OR51A4Q8NGJ6 313 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 OR5D14Q8NGL3 314 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 OR13F1Q8NGS4 319 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 TMEM106AQ96A25 262 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 RHOVQ96L33 236 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 TMED9Q9BVK6 235 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 NEK6Q9HC98 313 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 FOXJ3Q9UPW0 622 aa10.65□□□□□ -0.7
COPB1-208ENST00000532088 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 ANXA2P2A6NMY6 339 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 ARL6IP5O75915 188 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 PTBP3O95758 552 aaKnown RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 NRASP01111 189 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 ERCC1P07992 297 aaPredicted RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 PAX1P15863 534 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 CD36P16671 472 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 FAHP16930 419 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 TNFSF4P23510 183 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 FGF9P31371 208 aaPredicted RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 TGFBR2P37173 567 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 CD200P41217 278 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 RPS25P62851 125 aaKnown RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 CNN3Q15417 329 aaKnown RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 ZNF529Q6P280 563 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 Q6ZR03 302 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 ZDHHC23Q8IYP9 409 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 OR5AS1Q8N127 324 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 DNAAF1Q8NEP3 725 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 OR5A2Q8NGI9 324 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 SPSB1Q96BD6 273 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 FGGYQ96C11 551 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 YIPF6Q96EC8 236 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 ADAT3Q96EY9 351 aaPredicted RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 DERL3Q96Q80 235 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 PAPOLGQ9BWT3 736 aaKnown RBP10.64□□□□□ -0.71
COPB1-208ENST00000532088 ZCCHC4Q9H5U6 513 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 CXorf56Q9H5V9 222 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 STUB1Q9UNE7 303 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 LAMP3Q9UQV4 416 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 RHBDD3Q9Y3P4 386 aa10.64□□□□□ -0.71
COPB1-208ENST00000532088 ANKRD61A6NGH8 418 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 OR5B21A6NL26 309 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 GABRPO00591 440 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 MLNRO43193 412 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 UCHL1P09936 223 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 IGFBP3P17936 291 aaPredicted RBP10.63□□□□□ -0.71
COPB1-208ENST00000532088 PRKACBP22694 351 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 CRYBB2P43320 205 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 ALDH3B1P43353 468 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 PRDX4Q13162 271 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 OR8G1Q15617 311 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 CEACAM21Q3KPI0 293 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 NKAPLQ5M9Q1 402 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 GPR141Q7Z602 305 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 OR13C5Q8NGS8 318 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 NEU4Q8WWR8 484 aaPredicted RBP10.63□□□□□ -0.71
COPB1-208ENST00000532088 OR5P3Q8WZ94 311 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 PIGCQ92535 297 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 NINJ1Q92982 152 aa10.63□□□□□ -0.71
COPB1-208ENST00000532088 ERGIC1Q969X5 290 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms