RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 TRAV19A0A0A6YYK7 116 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CCL15-CCL14A0A0B4J2E2 113 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 MGAT4DA6NG13 374 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 SEC14L6B5MCN3 397 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 E7EWF7 191 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 M0R1B8 84 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 TAAR5O14804 337 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 PSPHP1O15172 72 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 SPAG7O75391 227 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 IGLV2-8P01709 118 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 LIPCP11150 499 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CD9P21926 228 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 PRKACBP22694 351 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 PAX6P26367 422 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 DEKP35659 375 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 TALDO1P37837 337 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 P2RY2P41231 377 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 TAS2R31P59538 309 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 KDSRQ06136 332 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 PPIDQ08752 370 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 C2orf80Q0P641 193 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 INCA1Q0VD86 236 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CCL15Q16663 113 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 ACTL10Q5JWF8 245 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 FAM27D1Q5T7N8 215 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 FAHD1Q6P587 224 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 FAM19A1Q7Z5A9 133 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 SETD3Q86TU7 594 aaPredicted RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 ZCCHC24Q8N2G6 241 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 DRAM1Q8N682 238 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 OTUD6BQ8N6M0 293 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CYB561A3Q8NBI2 242 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 UBAC2Q8NBM4 344 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 OR1J4Q8NGS1 313 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 OR10Z1Q8NGY1 313 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CDKL2Q92772 493 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 CDS1Q92903 461 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 RBMXL1Q96E39 390 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 ZBED3Q96IU2 234 aaPredicted RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 OR4K3Q96R72 315 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 ZNF382Q96SR6 550 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 TSNAXQ99598 290 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 KCNS3Q9BQ31 491 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 FRMD8P1Q9BZ68 369 aaPredicted RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 C1orf198Q9H425 327 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 ZNF430Q9H8G1 570 aaPredicted RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 PLEKHF2Q9H8W4 249 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 HEBP1Q9NRV9 189 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 DDX19AQ9NUU7 478 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 DDIT4Q9NX09 232 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 NDRG2Q9UN36 371 aaKnown RBP1.83□□□□□ -2.12
CD44-234ENST00000531873 TMEM14AQ9Y6G1 99 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 NUP205Q92621 2012 aa1.83□□□□□ -2.12
CD44-234ENST00000531873 ZNF608Q9ULD9 1512 aaPredicted RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 VWA8A3KMH1 1905 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 RAB19A4D1S5 217 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 OR5H1A6NKK0 313 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 HSBP1L1C9JCN9 74 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 H7C2Y5 167 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 J3QT63 122 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 FOXH1O75593 365 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 UPK1BO75841 260 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ZMPSTE24O75844 475 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 BRI3O95415 125 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 CST4P01036 141 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 PTHP01270 115 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 IGKV1D-16P01601 117 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 IGLV3-25P01717 112 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 IGHV3-11P01762 117 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 OR5AL1P0C617 328 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 SLC35G6P0C7Q6 338 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ZNF806P0C7X5 589 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 CD151P48509 253 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 KCNJ3P48549 501 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 IFITM3Q01628 133 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 XRCC4Q13426 336 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 UBE2SQ16763 222 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ZNF684Q5T5D7 378 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 OPN5Q6U736 354 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 LGI3Q8N145 548 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 CA13Q8N1Q1 262 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 LINC00469Q8N7U9 141 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 DRAXINQ8NBI3 349 aaPredicted RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 OR4M1Q8NGD0 313 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 RERGQ96A58 199 aaPredicted RBP1.82□□□□□ -2.12
CD44-234ENST00000531873 S100PBPQ96BU1 408 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ADTRPQ96IZ2 230 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 SULT4A1Q9BR01 284 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ACBD6Q9BR61 282 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 NDFIP1Q9BT67 221 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 EMC6Q9BV81 110 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 ULBP2Q9BZM5 246 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 PLEKHA1Q9HB21 404 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 TREM1Q9NP99 234 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 NRBP2Q9NSY0 501 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 NECAP2Q9NVZ3 263 aa1.82□□□□□ -2.12
CD44-234ENST00000531873 MRM2Q9UI43 246 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms