RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 ELL3Q9HB65 397 aaPredicted RBP6.25□□□□□ -1.41
NXF1-212ENST00000531872 ABCB10Q9NRK6 738 aa6.25□□□□□ -1.41
NXF1-212ENST00000531872 C19orf12Q9NSK7 152 aa6.25□□□□□ -1.41
NXF1-212ENST00000531872 MRPL22Q9NWU5 206 aaKnown RBP6.25□□□□□ -1.41
NXF1-212ENST00000531872 GAR1Q9NY12 217 aaKnown RBP6.25□□□□□ -1.41
NXF1-212ENST00000531872 ZMAT5Q9UDW3 170 aaKnown RBP6.25□□□□□ -1.41
NXF1-212ENST00000531872 KCNG2Q9UJ96 466 aa6.25□□□□□ -1.41
NXF1-212ENST00000531872 ZNF222Q9UK12 451 aa6.25□□□□□ -1.41
NXF1-212ENST00000531872 LRP12Q9Y561 859 aa6.25□□□□□ -1.41
NXF1-212ENST00000531872 HERC2O95714 4834 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 IGKV1D-17A0A075B6S4 117 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 OR2AT4A6NND4 320 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 H0YHG0 523 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 FXYD1O00168 92 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 AKR7A2O43488 359 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 IFNW1P05000 195 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 TROVE2P10155 538 aaKnown RBP eCLIP6.24□□□□□ -1.41
NXF1-212ENST00000531872 COX7A1P24310 79 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 OMPP47874 163 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 SLC25A1P53007 311 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 ERVFRD-1P60508 538 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 GMFBP60983 142 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 CYLC2Q14093 348 aaPredicted RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 PLA1AQ53H76 456 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 FAM76BQ5HYJ3 339 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 DMRTC1Q5HYR2 192 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 LDLRAD2Q5SZI1 272 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 RRM2BQ7LG56 351 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 SLC16A9Q7RTY1 509 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 VTCN1Q7Z7D3 282 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 CENPVQ7Z7K6 275 aaPredicted RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 CROCCP2Q86T23 111 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 ZDHHC21Q8IVQ6 265 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 FAM185AQ8N0U4 392 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 ZNRF1Q8ND25 227 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 RPL3LQ92901 407 aaKnown RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 FOXRED1Q96CU9 486 aaPredicted RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 MALSU1Q96EH3 234 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 SDSLQ96GA7 329 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 RSRC1Q96IZ7 334 aaKnown RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 NMNAT3Q96T66 252 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 SH3GL1Q99961 368 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 MCRIP2Q9BUT9 160 aaKnown RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 RPRD1BQ9NQG5 326 aaKnown RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 NKIRAS1Q9NYS0 192 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 NLKQ9UBE8 527 aa6.24□□□□□ -1.41
NXF1-212ENST00000531872 TBL2Q9Y4P3 447 aaKnown RBP6.24□□□□□ -1.41
NXF1-212ENST00000531872 hCG_38984A0A1B0GV85 526 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 A0A1W2PPH5 198 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 OR6C68A6NDL8 312 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 TMEM210A6NLX4 147 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 FAM90A22PA8MWA6 464 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 ODF3BA8MYP8 253 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 ARPC3O15145 178 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 RAMP3O60896 148 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 RENP00797 406 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 HLA-DQA2P01906 255 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 CCDC159P0C7I6 412 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 SLC2A1P11166 492 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 PSG2P11465 335 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 PSKH1P11801 424 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 HIST1H1CP16403 213 aaKnown RBP6.23□□□□□ -1.41
NXF1-212ENST00000531872 DCTDP32321 178 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 RPS27P42677 84 aaKnown RBP6.23□□□□□ -1.41
NXF1-212ENST00000531872 GABRA2P47869 451 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 THBS3P49746 956 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 PRKXP51817 358 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 DGCR2P98153 550 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 IL5RAQ01344 420 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 SSX2Q16385 188 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 KLHL12Q53G59 568 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 AGBL2Q5U5Z8 902 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 ZNF626Q68DY1 528 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 TMEM200BQ69YZ2 307 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 SMARCD3Q6STE5 483 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 UNQ9370/PRO34162Q6UXP9 181 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 TMEM185AQ8NFB2 350 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 OR4C15Q8NGM1 316 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 SGK3Q96BR1 496 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 ERMAPQ96PL5 475 aaPredicted RBP6.23□□□□□ -1.41
NXF1-212ENST00000531872 KCNJ15Q99712 375 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 MICU1Q9BPX6 476 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 USE1Q9NZ43 259 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 RHBDD3Q9Y3P4 386 aa6.23□□□□□ -1.41
NXF1-212ENST00000531872 hCG_1809904A0A1W2PP81 198 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 A0A1W2PPE2 198 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 A0A1W2PR64 198 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 A0A1W2PRQ8 180 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 A0A1W2PRV1 198 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 UNC119BA6NIH7 251 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 FAM220BPB1ANY3 271 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 ZNF823P16415 610 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 CCL3L1P16619 93 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 GLRA1P23415 457 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 AZGP1P25311 298 aaKnown RBP6.22□□□□□ -1.41
NXF1-212ENST00000531872 GNALP38405 381 aa6.22□□□□□ -1.41
NXF1-212ENST00000531872 GSK3AP49840 483 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms