RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	KAT8	Q9H7Z6	458 aa	Known RBP	4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	SENP1	Q9P0U3	644 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	VPS29	Q9UBQ0	182 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	ETV7	Q9Y603	341 aa		4.69	□□□□□ -1.66
PUM1-222	ENST00000531867	DOCK11	Q5JSL3	2073 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	COL7A1	Q02388	2944 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAV25	A0A0B4J276	109 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	SMCO3	A2RU48	225 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	OR6C65	A6NJZ3	312 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867		E7ESA3	106 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	NPIPB9	F8W1W9	429 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867		H3BTX0	84 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	LSM1	O15116	133 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TIMM8A	O60220	97 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	UPK3A	O75631	287 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	STAG3L2	P0CL84	134 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ACP2	P11117	423 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	PRPS2	P11908	318 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	UQCRB	P14927	111 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	HPGD	P15428	266 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	FKBP2	P26885	142 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	RPL3	P39023	403 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	MAGEA8	P43361	318 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CCNG1	P51959	295 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAP1	Q12931	704 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF154	Q13106	437 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	SLC17A1	Q14916	467 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	QPRT	Q15274	297 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	VPS26B	Q4G0F5	336 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TECRL	Q5HYJ1	363 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ASPHD1	Q5U4P2	390 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	RNASEK	Q6P5S7	137 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CASP12	Q6UXS9	341 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CYS1	Q717R9	158 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	SSX9	Q7RTT3	188 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	DPY19L4	Q7Z388	723 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	WDFY1	Q8IWB7	410 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	PDIK1L	Q8N165	341 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CDRT4	Q8N9R6	151 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	OR13F1	Q8NGS4	319 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CLHC1	Q8NHS4	586 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	LINC01006	Q8NI28	216 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	GPX8	Q8TED1	209 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	C17orf50	Q8WW18	174 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ST8SIA1	Q92185	356 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ELOVL6	Q9H5J4	265 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	GEMIN7	Q9H840	131 aa	Known RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	SPACA1	Q9HBV2	294 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	NOX3	Q9HBY0	568 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	MMP26	Q9NRE1	261 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	GIN1	Q9NXP7	522 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	PTTG2	Q9NZH5	202 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF225	Q9UK10	706 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	PCTP	Q9UKL6	214 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAPPC4	Q9Y296	219 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	WIPI2	Q9Y4P8	454 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	DSPP	Q9NZW4	1301 aa		4.68	□□□□□ -1.66
PUM1-222	ENST00000531867	TET2	Q6N021	2002 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	SRRM5	B3KS81	715 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	TRAPPC2L	H3BP13	241 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	NR5A2	O00482	541 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	ITM2A	O43736	263 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	PCDH7	O60245	1069 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	EIF4E2	O60573	245 aa	Known RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	PIAS1	O75925	651 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	NUDT14	O95848	222 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	TXNDC12	O95881	172 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	CRYGB	P07316	175 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	HSMCR30	P0CW71	290 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF35	P13682	527 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	GFAP	P14136	432 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	ZNF12	P17014	697 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	TCN1	P20061	433 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	CRABP2	P29373	138 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	GLRX	P35754	106 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	ARR3	P36575	388 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	CRYBB2	P43320	205 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	NKX2-1	P43699	371 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	RASSF2	P50749	326 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	PAX8	Q06710	450 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	FASTKD3	Q14CZ7	662 aa	Known RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	DUSP5	Q16690	384 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	AVPI1	Q5T686	147 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	AP1AR	Q63HQ0	302 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	FAM71E1	Q6IPT2	247 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	DEGS2	Q6QHC5	323 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	CMC1	Q7Z7K0	106 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	SATL1	Q86VE3	508 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	TPRA1	Q86W33	373 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	MICU2	Q8IYU8	434 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	MMGT1	Q8N4V1	131 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	GBGT1	Q8N5D6	347 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	TMEM86B	Q8N661	226 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	LINC00469	Q8N7U9	141 aa		4.67	□□□□□ -1.66
PUM1-222	ENST00000531867	OR4F6	Q8NGB9	312 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms