RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 GCM1Q9NP62 436 aa13.78□□□□□ -0.2
LRFN4-203ENST00000531590 GPR173Q9NS66 373 aa13.78□□□□□ -0.2
LRFN4-203ENST00000531590 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
LRFN4-203ENST00000531590 HHLA2Q9UM44 414 aa13.78□□□□□ -0.2
LRFN4-203ENST00000531590 NOP16Q9Y3C1 178 aaKnown RBP13.78□□□□□ -0.2
LRFN4-203ENST00000531590 PNMA8CA0A1B0GUJ8 204 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 PTBP3O95758 552 aaKnown RBP13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CSF3P09919 207 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 TNFRSF1AP19438 455 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 THBS2P35442 1172 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CDH15P55291 814 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 DSCR9P59020 149 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 SPHARQ15513 63 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 MED22Q15528 200 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 MPPED2Q15777 294 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 ARFGEF3Q5TH69 2177 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 MOGAT3Q86VF5 341 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CELF2-AS1Q8N7Q2 184 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 SPERTQ8NA61 448 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CCDC54Q8NEL0 328 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 OR13C5Q8NGS8 318 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 OR8S1Q8NH09 359 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF420Q8TAQ5 688 aaPredicted RBP13.77□□□□□ -0.21
LRFN4-203ENST00000531590 OR5P3Q8WZ94 311 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CCL17Q92583 94 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 YTHDF1Q9BYJ9 559 aaKnown RBP13.77□□□□□ -0.21
LRFN4-203ENST00000531590 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 CHODLQ9H9P2 273 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 PLEKHA1Q9HB21 404 aa13.77□□□□□ -0.21
LRFN4-203ENST00000531590 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.76□□□□□ -0.21
LRFN4-203ENST00000531590 ANXA2P2A6NMY6 339 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 NRASP01111 189 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF12P17014 697 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 GATA4P43694 442 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 TAS2R43P59537 309 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 HOXA4Q00056 320 aaPredicted RBP13.76□□□□□ -0.21
LRFN4-203ENST00000531590 ACSM1Q08AH1 577 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 CEACAM21Q3KPI0 293 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 CLVS2Q5SYC1 327 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 SPNS3Q6ZMD2 512 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 MOB3CQ70IA8 216 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 OR13C3Q8NGS6 347 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 GHSRQ92847 366 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 FGGYQ96C11 551 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 MICU1Q9BPX6 476 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 DLL4Q9NR61 685 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 TMEM106BQ9NUM4 274 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 UFSP2Q9NUQ7 469 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
LRFN4-203ENST00000531590 CCDC168Q8NDH2 2452 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 A0A096LNT2 108 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 ANKRD61A6NGH8 418 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 NDUFS8O00217 210 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 PLPP2O43688 288 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 GRPP07492 148 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 CELP19835 753 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 GIFP27352 417 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
LRFN4-203ENST00000531590 BDH1Q02338 343 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF154Q13106 437 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 TBCEQ15813 527 aaPredicted RBP13.75□□□□□ -0.21
LRFN4-203ENST00000531590 UBE2V2Q15819 145 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 HFEQ30201 348 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 PLCXD3Q63HM9 321 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 C11orf53Q8IXP5 236 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 SPARTQ8N0X7 666 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 CIARTQ8N365 385 aaPredicted RBP13.75□□□□□ -0.21
LRFN4-203ENST00000531590 OR1M1Q8NGA1 313 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 RNF170Q96K19 258 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 PIMREGQ9BSJ6 248 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 RTL8AQ9BWD3 113 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 CHST5Q9GZS9 411 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 ABCB9Q9NP78 766 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 ACOT13Q9NPJ3 140 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF281Q9Y2X9 895 aa13.75□□□□□ -0.21
LRFN4-203ENST00000531590 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 RNF223E7ERA6 249 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 PPIHO43447 177 aaKnown RBP13.74□□□□□ -0.21
LRFN4-203ENST00000531590 MRPS14O60783 128 aaKnown RBP13.74□□□□□ -0.21
LRFN4-203ENST00000531590 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
LRFN4-203ENST00000531590 NR4A2P43354 598 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 SOX2P48431 317 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 GPM6AP51674 278 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 EMX1Q04741 257 aaPredicted RBP13.74□□□□□ -0.21
LRFN4-203ENST00000531590 KCTD21Q4G0X4 260 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF826PQ6ZT77 177 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 Q8TCH9 128 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 TSEN15Q8WW01 171 aaKnown RBP13.74□□□□□ -0.21
LRFN4-203ENST00000531590 C10orf35Q96D05 121 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 C14orf119Q9NWQ9 140 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 DHDHQ9UQ10 334 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 LRCH1Q9Y2L9 728 aa13.74□□□□□ -0.21
LRFN4-203ENST00000531590 PRRC2AP48634 2157 aaKnown RBP13.73□□□□□ -0.21
LRFN4-203ENST00000531590 IGHV4-61A0A0C4DH41 118 aa13.73□□□□□ -0.21
LRFN4-203ENST00000531590 IGKV1-9A0A0C4DH69 117 aa13.73□□□□□ -0.21
LRFN4-203ENST00000531590 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
LRFN4-203ENST00000531590 CLDN25C9JDP6 229 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms