RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 YPEL2Q96QA6 119 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 ALG12Q9BV10 488 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 KIR3DX1Q9H7L2 352 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 METTL8Q9H825 291 aaKnown RBP7.21□□□□□ -1.25
CSDE1-214ENST00000530886 WFDC1Q9HC57 220 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 FBLN5Q9UBX5 448 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 APOBEC3BQ9UH17 382 aaKnown RBP7.21□□□□□ -1.25
CSDE1-214ENST00000530886 TRPM6Q9BX84 2022 aa7.21□□□□□ -1.25
CSDE1-214ENST00000530886 CLEC18AA5D8T8 446 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CTSHP09668 335 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 KLK2P20151 261 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 SERPINA2P20848 420 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CHRNB4P30926 498 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF793Q6ZN11 406 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF705AQ6ZN79 300 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 LINC01551Q86U37 167 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF100Q8IYN0 542 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CLEC18CQ8NCF0 446 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 OR56B2PQ8NGI1 322 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 OR51L1Q8NGJ5 315 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 FOXJ2Q9P0K8 574 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 B3GAT1Q9P2W7 334 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 PADI3Q9ULW8 664 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 WDR45Q9Y484 360 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 IER3IP1Q9Y5U9 82 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 WSB1Q9Y6I7 421 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CDC14CA4D256 554 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 OR2AG2A6NM03 316 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 RRP8O43159 456 aaKnown RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CEACAM8P31997 349 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ZFP36L1Q07352 338 aaKnown RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 UBE2V1Q13404 147 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 TAF9Q16594 264 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ACOT6Q3I5F7 207 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 MORN2Q502X0 79 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 MFSD12Q6NUT3 480 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 DPPA3Q6W0C5 159 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 GRINAQ7Z429 371 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 HSD11B1LQ7Z5J1 315 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF619Q8N2I2 560 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 ADAMTS15Q8TE58 950 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 TSLPQ969D9 159 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 GLYATL1Q969I3 302 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 NRTNQ99748 197 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 PARP12Q9H0J9 701 aaKnown RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 RBKSQ9H477 322 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 CLDN16Q9Y5I7 305 aa7.21□□□□□ -1.26
CSDE1-214ENST00000530886 MRPS18BQ9Y676 258 aaKnown RBP7.21□□□□□ -1.26
CSDE1-214ENST00000530886 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CLEC3AO75596 197 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 PRH1P02810 166 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 NGFRP08138 427 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CSNK2A2P19784 350 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ELLP55199 621 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 FAM3BP58499 235 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 HIST1H3AP68431 136 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ELOA3BQ3SY89 546 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ACTL10Q5JWF8 245 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TIPARPQ7Z3E1 657 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ADIPOR2Q86V24 386 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 SGPP2Q8IWX5 399 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CYB561D1Q8N8Q1 229 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ELOA3Q8NG57 546 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 ZNF681Q96N22 645 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TRIM2Q9C040 744 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CSTL1Q9H114 145 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 WSB2Q9NYS7 404 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 RNF181Q9P0P0 153 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 RANBP2P49792 3224 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 SYNGR4O95473 234 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 MMP7P09237 267 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 PTNP21246 168 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 RPS4XP62701 263 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 PMS2P11Q13670 270 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 FZD2Q14332 565 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 SLC9A3R2Q15599 337 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 HYAL4Q2M3T9 481 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TRMT12Q53H54 448 aaKnown RBP7.2□□□□□ -1.26
CSDE1-214ENST00000530886 SLC48A1Q6P1K1 146 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 D2HGDHQ8N465 521 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CLDND2Q8NHS1 167 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TP53RKQ96S44 253 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 NMNAT3Q96T66 252 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 MAGT1Q9H0U3 335 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 C1orf123Q9NWV4 160 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 SCN2AQ99250 2005 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TRAV1-1A0A0B4J248 108 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 FITM1A5D6W6 292 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 MYADML2A6NDP7 307 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CTSVO60911 334 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 LILRB3O75022 631 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 NDUFB8O95169 186 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 TYMSP04818 313 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 LAMP2P13473 410 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CD52P31358 61 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 GALNSP34059 522 aa7.2□□□□□ -1.26
CSDE1-214ENST00000530886 CCL20P78556 96 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms