RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 PRSS42Q7Z5A4 293 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 DTWD2Q8NBA8 298 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 KCNG3Q8TAE7 436 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 ZFAND1Q8TCF1 268 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 ZNF2Q9BSG1 426 aaPredicted RBP11.11□□□□□ -0.63
BDNF-215ENST00000530861 SRXN1Q9BYN0 137 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 LHFPL6Q9Y693 200 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 VSIG10L2P0DP72 767 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 SERPINF1P36955 418 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 SNAI3Q3KNW1 292 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 HIKESHIQ53FT3 197 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 LINC00114Q6XXX2 140 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 C17orf78Q8N4C9 275 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
BDNF-215ENST00000530861 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 PPP1R1CQ8WVI7 109 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 DLL4Q9NR61 685 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 H3BP45 60 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 IGF2P01344 180 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 RAF1P04049 648 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 CBX5P45973 191 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 RAB1AP62820 205 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 OR10R2Q8NGX6 335 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 POC1BQ8TC44 478 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 WNT2BQ93097 391 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 VRK1Q99986 396 aaPredicted RBP11.11□□□□□ -0.63
BDNF-215ENST00000530861 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
BDNF-215ENST00000530861 ZNF71Q9NQZ8 489 aaPredicted RBP11.11□□□□□ -0.63
BDNF-215ENST00000530861 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
BDNF-215ENST00000530861 H7C417 338 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 EIF1BO60739 113 aaKnown RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 IFNA21P01568 189 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 IGLV3-19P01714 112 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 UMODP07911 640 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 CLINT1Q14677 625 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 BPHLQ86WA6 291 aaPredicted RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 C15orf40Q8WUR7 153 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 NMNAT2Q9BZQ4 307 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 MTFP1Q9UDX5 166 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 ST3GAL6Q9Y274 331 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 AQP8O94778 261 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 ICAM2P13598 275 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 PCOLCEQ15113 449 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 LGALSLQ3ZCW2 172 aaPredicted RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 DUSP18Q8NEJ0 188 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 APH1AQ96BI3 265 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 ZNF175Q9Y473 711 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 GJE1A6NN92 205 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 SULT1B1O43704 296 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
BDNF-215ENST00000530861 NRASP01111 189 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 NR2C1P13056 603 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 PPP3CBP16298 524 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 NME2P22392 152 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 GLP1RP43220 463 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 SUCLG1P53597 346 aaKnown RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 ATP1B3P54709 279 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 MALLQ13021 153 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 DHRS2Q13268 280 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 KLF9Q13886 244 aaPredicted RBP11.1□□□□□ -0.63
BDNF-215ENST00000530861 EDDM3AQ14507 147 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 CATSPERDQ86XM0 798 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 TMED6Q8WW62 240 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 SLAMF9Q96A28 289 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 SLA2Q9H6Q3 261 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 NUP50Q9UKX7 468 aa11.1□□□□□ -0.63
BDNF-215ENST00000530861 NCOA6Q14686 2063 aaPredicted RBP11.09□□□□□ -0.63
BDNF-215ENST00000530861 OR5H14A6NHG9 310 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 SNTB1Q13884 538 aaKnown RBP11.09□□□□□ -0.63
BDNF-215ENST00000530861 ELFN2Q5R3F8 820 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 HSD17B11Q8NBQ5 300 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 HSD17B6O14756 317 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 AGFG2O95081 481 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 APLNRP35414 380 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 MLF1P58340 268 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 ACSM1Q08AH1 577 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 CD276Q5ZPR3 534 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 SLC43A2Q8N370 569 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 OR56B2PQ8NGI1 322 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 CD46P15529 392 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
BDNF-215ENST00000530861 RBM39Q14498 530 aaKnown RBP11.09□□□□□ -0.63
BDNF-215ENST00000530861 TRIP6Q15654 476 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms