RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 CSNK1A1P48729 337 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 SRP9P49458 86 aaKnown RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 ZNF138P52744 262 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NKX2-5P52952 324 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 OR2B6P58173 313 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NAA20P61599 178 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ARF6P62330 175 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ESRRGP62508 458 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 TSPAN31Q12999 210 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 SRSF5Q13243 272 aaKnown RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 GPR176Q14439 515 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 PDK2Q15119 407 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 TMED2Q15363 201 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 RGNQ15493 299 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ZNHIT3Q15649 155 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 TOMM34Q15785 309 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 KCNJ8Q15842 424 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 CTSL3PQ5NE16 218 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 HACD4Q5VWC8 232 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ANKRD26P1Q6NSI1 321 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NANOGP8Q6NSW7 305 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 XKRXQ6PP77 449 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 Q6ZSR3 168 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 SSX9Q7RTT3 188 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 DPPA2Q7Z7J5 298 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NELFCDQ8IXH7 590 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 TMEM35BQ8NCS4 154 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 TMEM104Q8NE00 496 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 OR2D3Q8NGH3 330 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ELMO1Q92556 727 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ZNF514Q96K75 400 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 ZNF317Q96PQ6 595 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 P2RX4Q99571 388 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 C12orf57Q99622 126 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 KCTD14Q9BQ13 255 aaPredicted RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 SEC22CQ9BRL7 303 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 C11orf70Q9BRQ4 267 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 BCL2L14Q9BZR8 327 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ING2Q9H160 280 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ASCL3Q9NQ33 180 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NRBP2Q9NSY0 501 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ETNK2Q9NVF9 386 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 PISDQ9UG56 409 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 RSL24D1Q9UHA3 163 aaKnown RBP2.5□□□□□ -2.01
CTR9-204ENST00000529355 ZNF229Q9UJW7 825 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ST3GAL6Q9Y274 331 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 WIF1Q9Y5W5 379 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 CCDC88BA6NC98 1476 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 MYH3P11055 1940 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 PBRM1Q86U86 1689 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 ITSN2Q9NZM3 1697 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 RTEL1-TNFRSF6BF6WH68 1400 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 DAPK1P53355 1430 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 NCOA1Q15788 1441 aa2.5□□□□□ -2.01
CTR9-204ENST00000529355 RFX7Q2KHR2 1363 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 KIAA0232Q92628 1395 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 METTL15A6NJ78 407 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SUPT3HB4E1H0 165 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CCRL2O00421 344 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 EIF1BO60739 113 aaKnown RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 DNAJB6O75190 326 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 LDOC1O95751 146 aaPredicted RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 CLIC3O95833 236 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SERPIND1P05546 499 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CD3GP09693 182 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CD36P16671 472 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PSMC3P17980 439 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 DTYMKP23919 212 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 G0S2P27469 103 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CEACAM6P40199 344 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 EIF1P41567 113 aaKnown RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 GPR4P46093 362 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 RGS6P49758 472 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 UGT2B15P54855 530 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CLDN8P56748 225 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 AP3S2P59780 193 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PLP1P60201 277 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 KCNJ2P63252 427 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 DEFA6Q01524 100 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PIGHQ14442 188 aaPredicted RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 ITIH4Q14624 930 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 TGFBIQ15582 683 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 SNRNP35Q16560 246 aaKnown RBP2.49□□□□□ -2.01
CTR9-204ENST00000529355 GOLGA7BQ2TAP0 167 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 NDUFAF6Q330K2 333 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PTPN20Q4JDL3 420 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 COQ5Q5HYK3 327 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CDKL4Q5MAI5 379 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 GPR107Q5VW38 600 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 MFSD14CQ5VZR4 134 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 CARD17Q5XLA6 110 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PLET1Q6UQ28 207 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 TMEM205Q6UW68 189 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 TMEM179Q6ZVK1 233 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 H2AFVQ71UI9 128 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 PAGE2Q7Z2X7 111 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 VTCN1Q7Z7D3 282 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 LUZP2Q86TE4 346 aa2.49□□□□□ -2.01
CTR9-204ENST00000529355 LRRC8AQ8IWT6 810 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms