RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 G3V2T6 193 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 G3V4G9 280 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TIMM23O14925 209 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PRODHO43272 600 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SELENOFO60613 162 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MITFO75030 526 aaPredicted RBP7.08□□□□□ -1.28
SSBP3-212ENST00000528930 IGHV2-70P01814 119 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 HLA-DPB1P04440 258 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SLC2A1P11166 492 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SELEP16581 610 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PAICSP22234 425 aaKnown RBP7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MYF6P23409 242 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TNFSF4P23510 183 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 EPHA2P29317 976 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PMELP40967 661 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SLC6A9P48067 706 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MALLQ13021 153 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MAB21L1Q13394 359 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SNAPC1Q16533 368 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 KLHL12Q53G59 568 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SLC35D3Q5M8T2 416 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 GLYATL3Q5SZD4 288 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 THOC7Q6I9Y2 204 aaKnown RBP7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PGAP1Q75T13 922 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SHFQ7M4L6 423 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PRSS45Q7RTY3 260 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 BHLHE23Q8NDY6 225 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 OR10AD1Q8NGE0 317 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 OR6N2Q8NGY6 317 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 OTOSQ8NHW6 89 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TBC1D15Q8TC07 691 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 CHAC2Q8WUX2 184 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 UBE2FQ969M7 185 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SPSB4Q96A44 273 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM186Q96B77 213 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 ISOC1Q96CN7 298 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TIMD4Q96H15 378 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 SLC6A7Q99884 636 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 COPS4Q9BT78 406 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MROQ9BYG7 248 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TOR3AQ9H497 397 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 LPAR2Q9HBW0 351 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM100Q9NV29 134 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 TVP23BQ9NYZ1 205 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF319Q9P2F9 582 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 PPP1R3CQ9UQK1 317 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 MMP24Q9Y5R2 645 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 WNK2Q9Y3S1 2297 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
SSBP3-212ENST00000528930 LCE6AA0A183 80 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 CCDC182A6NF36 153 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 CD300LBA8K4G0 201 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM178BH3BS89 294 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 PLPP2O43688 288 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 PRKYO43930 277 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 PTBP3O95758 552 aaKnown RBP7.07□□□□□ -1.28
SSBP3-212ENST00000528930 MSMBP08118 114 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 FCGR1AP12314 374 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 OPRL1P41146 370 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 CD200P41217 278 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 NAA10P41227 235 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-212ENST00000528930 SLC15A1P46059 708 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 CX3CR1P49238 355 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 HCCSP53701 268 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 RAD23AP54725 363 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 GRB2P62993 217 aaKnown RBP7.07□□□□□ -1.28
SSBP3-212ENST00000528930 FAM3AP98173 230 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 OXA1LQ15070 435 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 TAF13Q15543 124 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 FAM189A2Q15884 450 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 ZNF181Q2M3W8 571 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 SLX4IPQ5VYV7 408 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 GLCCI1Q86VQ1 547 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 LRRC28Q86X40 367 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-212ENST00000528930 CENPSQ8N2Z9 138 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 OR51F2Q8NH61 342 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 S100ZQ8WXG8 99 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 TEAD3Q99594 435 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 SEMA6AQ9H2E6 1030 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 TMEM165Q9HC07 324 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 G6PC2Q9NQR9 355 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 KRT84Q9NSB2 600 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 HIF1ANQ9NWT6 349 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 KIF17Q9P2E2 1029 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 KLHDC2Q9Y2U9 406 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 ARHGAP32A7KAX9 2087 aa7.07□□□□□ -1.28
SSBP3-212ENST00000528930 TRAV20A0A0B4J274 112 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 IGHV3-64DA0A0J9YX35 117 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ISPDA4D126 451 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SLC22A31A6NKX4 558 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ZAR1LA6NP61 321 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 XRCC2O43543 280 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 TSPAN15O95858 294 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-212ENST00000528930 SBK2P0C263 348 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ATP6V1B1P15313 513 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 ALOX5APP20292 161 aa7.06□□□□□ -1.28
SSBP3-212ENST00000528930 MDKP21741 143 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms