RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 KBTBD11O94819 623 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 CCNE2O96020 404 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 HMGN1P05114 100 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 RPS17P08708 135 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 NQO1P15559 274 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 DTYMKP23919 212 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 RFC3P40938 356 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 RANBP1P43487 201 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 SSR4P51571 173 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 RAP1GDS1P52306 607 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 TAS2R60P59551 318 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 SMARCB1Q12824 385 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 PDIA2Q13087 525 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 RUNX3Q13761 415 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 OXA1LQ15070 435 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 GUK1Q16774 197 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 Q1RN00 199 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 C17orf58Q2M2W7 97 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 TRIM16LQ309B1 348 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 BSXQ3C1V8 233 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 FAM199XQ6PEV8 388 aaPredicted RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 CXCL17Q6UXB2 119 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 NAXDQ8IW45 347 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 NTAN1Q96AB6 310 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 FLYWCH2Q96CP2 140 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 SH3GL3Q99963 347 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 NAT10Q9H0A0 1025 aaKnown RBP4.38□□□□□ -1.71
PCF11-202ENST00000528336 ING2Q9H160 280 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 C11orf49Q9H6J7 331 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 CWH43Q9H720 699 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 C12orf10Q9HB07 376 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ISYNA1Q9NPH2 558 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ASCL3Q9NQ33 180 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 MCUBQ9NWR8 336 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 PRODH2Q9UF12 536 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 LGALS13Q9UHV8 139 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 STOML2Q9UJZ1 356 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 COPS3Q9UNS2 423 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 MTCH2Q9Y6C9 303 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 USH1CQ9Y6N9 552 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 ELP1O95163 1332 aa4.38□□□□□ -1.71
PCF11-202ENST00000528336 MKI67P46013 3256 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 IGKV6D-21A0A0A0MT36 114 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 A0A0B4J2E0 115 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 A0A1B0GX12 115 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 SLC9A3R1O14745 358 aaPredicted RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 MAGEB4O15481 346 aaPredicted RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 ERI3O43414 337 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 PRKYO43930 277 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 MPZL1O95297 269 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 UTS2O95399 124 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 OXSR1O95747 527 aaPredicted RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 HLA-AP01891 365 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 TCRBP04435 133 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 ZNF286BP0CG31 522 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 C8orf88P0DMB2 117 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 RNH1P13489 461 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 GFAPP14136 432 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 IL12AP29459 219 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 IDH2P48735 452 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 HCAR3P49019 387 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 PRKXP51817 358 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 TAS2R39P59534 338 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 RND3P61587 244 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 SP4Q02446 784 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 CKAP4Q07065 602 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 POU2AF1Q16633 256 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 C14orf28Q4W4Y0 310 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 VAX1Q5SQQ9 334 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 Q6ZT83 130 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 FAM19A1Q7Z5A9 133 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
PCF11-202ENST00000528336 SLC22A18ASQ8N1D0 253 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 KLHL30-AS1Q8NEE0 82 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 OR51A7Q8NH64 312 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 SYNPRQ8TBG9 265 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 C22orf15Q8WYQ4 148 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 DNAJA3Q96EY1 480 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 TMEM59Q9BXS4 323 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 ABCC13Q9NSE7 274 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 C19orf12Q9NSK7 152 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 IL17CQ9P0M4 197 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 UVRAGQ9P2Y5 699 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 VSIG4Q9Y279 399 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 ACOT9Q9Y305 439 aa4.37□□□□□ -1.71
PCF11-202ENST00000528336 MYH7BA7E2Y1 1941 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 ADAMTS9Q9P2N4 1935 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 SMIM28A0A1B0GU29 152 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 SEC14L6B5MCN3 397 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 FTCDNL1E5RQL4 147 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 H0Y980 276 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 CDC7O00311 574 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 CCL21O00585 134 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 HPGDSO60760 199 aa4.36□□□□□ -1.71
PCF11-202ENST00000528336 EEDO75530 441 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms