RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 ZNF879B4DU55 563 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ADAM20O43506 726 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 GRPP07492 148 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 MMP9P14780 707 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ACKR3P25106 362 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 MAP2K3P46734 347 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ACTR3P61158 418 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 RPS7P62081 194 aaKnown RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ZNF829Q3KNS6 432 aaPredicted RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 AADACL4Q5VUY2 407 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 TMEM236Q5W0B7 351 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 C12orf73Q69YU5 71 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 Q6ZSR3 168 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ZNF826PQ6ZT77 177 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 MEPCEQ7L2J0 689 aaKnown RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 SLC36A1Q7Z2H8 476 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 KRT77Q7Z794 578 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 ZDHHC13Q8IUH4 622 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 OR8B4Q96RC9 309 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 MROQ9BYG7 248 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 MOB1AQ9H8S9 216 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 NOX4Q9NPH5 578 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 KRT84Q9NSB2 600 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 DNAJC27Q9NZQ0 273 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 NUFIP1Q9UHK0 495 aaKnown RBP9.22□□□□□ -0.93
NR1H3-230ENST00000527949 KLHDC2Q9Y2U9 406 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 AP4S1Q9Y587 144 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 N6AMT1Q9Y5N5 214 aa9.22□□□□□ -0.93
NR1H3-230ENST00000527949 TGP01266 2768 aa9.21□□□□□ -0.93
NR1H3-230ENST00000527949 ZNF816-ZNF321PA0A0X1KG74 233 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 hCG_1807616A0A1W2PRN6 198 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 DHRS7CA6NNS2 312 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 G3V2T6 193 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TGM4P49221 684 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 RIDAP52758 137 aaKnown RBP9.21□□□□□ -0.94
NR1H3-230ENST00000527949 FGF12P61328 243 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 BAMBIQ13145 260 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 PRDX4Q13162 271 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TMED1Q13445 227 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 PDCD1Q15116 288 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 GPR157Q5UAW9 335 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 SFRP4Q6FHJ7 346 aaPredicted RBP9.21□□□□□ -0.94
NR1H3-230ENST00000527949 GID4Q8IVV7 300 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TMEM86BQ8N661 226 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 KIR3DL3Q8N743 410 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 LY6G5BQ8NDX9 201 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 C8orf46Q8TAG6 207 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TMEM163Q8TC26 289 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 LYZL4Q96KX0 146 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 C1orf147Q96MC9 270 aaPredicted RBP9.21□□□□□ -0.94
NR1H3-230ENST00000527949 ZNF48Q96MX3 618 aaPredicted RBP9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TECTBQ96PL2 329 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.94
NR1H3-230ENST00000527949 PKP2Q99959 881 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 SIRPDQ9H106 197 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 MMP24Q9Y5R2 645 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 KPTNQ9Y664 436 aa9.21□□□□□ -0.94
NR1H3-230ENST00000527949 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 TMEM269A0A1B0GVZ9 245 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 OR5B21A6NL26 309 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 DVL1O14640 695 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 PRKYO43930 277 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 SRSF10O75494 262 aaKnown RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 GYPAP02724 150 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 RPL15P61313 204 aaKnown RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 GNG3P63215 75 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 CSNK2BP67870 215 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 EGR3Q06889 387 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 POU4F2Q12837 409 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 CEACAM21Q3KPI0 293 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 C1orf146Q5VVC0 180 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 STUMQ69YW2 141 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 METAP1DQ6UB28 335 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 C1orf122Q6ZSJ8 110 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 ZDHHC23Q8IYP9 409 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 BCL6BQ8N143 479 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 C19orf18Q8NEA5 215 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 OR5A2Q8NGI9 324 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 HPSE2Q8WWQ2 592 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 C22orf15Q8WYQ4 148 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 CENPNQ96H22 339 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 MED30Q96HR3 178 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 WDFY2Q96P53 400 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 RAB3IPQ96QF0 476 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 HIST1H2AAQ96QV6 131 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 GABARAPL3Q9BY60 117 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 SMURF1Q9HCE7 757 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 CLN6Q9NWW5 311 aa9.2□□□□□ -0.94
NR1H3-230ENST00000527949 H2AFY2Q9P0M6 372 aaPredicted RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 WARS2Q9UGM6 360 aaKnown RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 RPUSD1Q9UJJ7 312 aaKnown RBP9.2□□□□□ -0.94
NR1H3-230ENST00000527949 ZNF850A8MQ14 1090 aa9.19□□□□□ -0.94
NR1H3-230ENST00000527949 CDIPTO14735 213 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms