RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZNF816-ZNF321PA0A0X1KG74 233 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 SAC3D1A6NKF1 404 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 ZNF850A8MQ14 1090 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 ADAM20O43506 726 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 ENSAO43768 121 aaKnown RBP27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 EGR1P18146 543 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 CXCR4P61073 352 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 EGR3Q06889 387 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 POU4F2Q12837 409 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 MICBQ29980 383 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 ZDHHC23Q8IYP9 409 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 OR8J1Q8NGP2 316 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 C12orf43Q96C57 262 aaKnown RBP27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 RIBC2Q9H4K1 309 aa27.48■■□□□ 1.99
SSSCA1-205ENST00000527920 SRRM5B3KS81 715 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 ZNF670-ZNF695F2Z2N8 137 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 TRIM77I1YAP6 450 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 HTR1FP30939 366 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 POLR2IP36954 125 aaKnown RBP27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 KPNB1Q14974 876 aaKnown RBP27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 ZBTB37Q5TC79 503 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 OR10Z1Q8NGY1 313 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 FAM216AQ8WUB2 273 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 HPSE2Q8WWQ2 592 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 TECTBQ96PL2 329 aa27.47■■□□□ 1.99
SSSCA1-205ENST00000527920 C22orf46C9J442 243 aa27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 SRSF10O75494 262 aaKnown RBP27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 RGS9O75916 674 aaPredicted RBP27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 TMED1Q13445 227 aa27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 PIGCQ92535 297 aa27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 ZNF69Q9UC07 566 aa27.46■■□□□ 1.99
SSSCA1-205ENST00000527920 H3BNX3 289 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 CDIPTO14735 213 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 GYPAP02724 150 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 ALPLP05186 524 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 LIPFP07098 398 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 C9orf139Q6ZV77 190 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 C10orf67Q8IYJ2 551 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 OR51E1Q8TCB6 317 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 C22orf15Q8WYQ4 148 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 HIST1H2AAQ96QV6 131 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 TTTY10Q9BZA0 68 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 GPR84Q9NQS5 396 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 USE1Q9NZ43 259 aa27.45■■□□□ 1.98
SSSCA1-205ENST00000527920 RIPPLY1Q0D2K3 151 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 DOK3Q7L591 496 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 COMMD2Q86X83 199 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 OR51G2Q8NGK0 314 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 RNF170Q96K19 258 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 APOL4Q9BPW4 351 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 FGF23Q9GZV9 251 aaPredicted RBP27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 SMURF1Q9HCE7 757 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 R4GMQ9 66 aa27.44■■□□□ 1.98
SSSCA1-205ENST00000527920 LOC110117498-PIK3R3F6TDL0 507 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 PLATP00750 562 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 TTRP02766 147 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 CDC42P60953 191 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 MFGE8Q08431 387 aaPredicted RBP27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 RBMS3Q6XE24 437 aaKnown RBP27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 TRUB1Q8WWH5 349 aaKnown RBP27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 RFKQ969G6 155 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 MRM2Q9UI43 246 aaKnown RBP27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 FBN3Q75N90 2809 aa27.43■■□□□ 1.98
SSSCA1-205ENST00000527920 TMPRSS2O15393 492 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 MTRF1O75570 445 aaKnown RBP27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 DHRS3O75911 302 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 ECDO95905 644 aaPredicted RBP27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 OR2T7P0C7T2 308 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 GNG3P63215 75 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 CEACAM21Q3KPI0 293 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 ELMOD2Q8IZ81 293 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 ZDHHC22Q8N966 263 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 SCCPDHQ8NBX0 429 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 OR2T27Q8NH04 317 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 ESM1Q9NQ30 184 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 ORC6Q9Y5N6 252 aa27.42■■□□□ 1.98
SSSCA1-205ENST00000527920 IGHV3OR15-7A0A075B7D8 119 aa27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 ATPAF1Q5TC12 328 aaPredicted RBP27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 KCTD8Q6ZWB6 473 aa27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 THAP5Q7Z6K1 395 aa27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 PNLDC1Q8NA58 520 aaKnown RBP27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 RPL3LQ92901 407 aaKnown RBP27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 FAM71F1Q96KD3 344 aaPredicted RBP27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 DNTTIP1Q9H147 329 aa27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 SNX5Q9Y5X3 404 aa27.41■■□□□ 1.98
SSSCA1-205ENST00000527920 OR5B21A6NL26 309 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 EBAG9O00559 213 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 DVL1O14640 695 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 IGHV4-38-2P0DP08 117 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 BPIFB3P59826 476 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 FGF12P61328 243 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 WDR38Q5JTN6 314 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 BCL2L15Q5TBC7 163 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 Q6ZSR3 168 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 SLC36A1Q7Z2H8 476 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 OR5A2Q8NGI9 324 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 EME1Q96AY2 570 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 HRASLS5Q96KN8 279 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms