RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 RPL3LQ92901 407 aaKnown RBP13.12□□□□□ -0.31
LTBP3-209ENST00000527792 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-209ENST00000527792 TRMT61AQ96FX7 289 aaKnown RBP13.12□□□□□ -0.31
LTBP3-209ENST00000527792 SLITRK2Q9H156 845 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 TCF7L1Q9HCS4 588 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
LTBP3-209ENST00000527792 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
LTBP3-209ENST00000527792 MRPL15Q9P015 296 aaKnown RBP13.12□□□□□ -0.31
LTBP3-209ENST00000527792 TRBV5-7A0A0A0MS05 114 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 M0R233 179 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 PIN1P1O15428 100 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 GMDSO60547 372 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 SC5DO75845 299 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 RAF1P04049 648 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 NAT2P11245 290 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 GALP22466 123 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 MYL9P24844 172 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 EVX1P49640 407 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ZNF81P51508 661 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 DMRTC1Q5HYR2 192 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 CD200R1LQ6Q8B3 271 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ANKRD13BQ86YJ7 626 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ZDHHC23Q8IYP9 409 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 PARP16Q8N5Y8 322 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 OR13C9Q8NGT0 318 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 OR13G1Q8NGZ3 307 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 TRMT10AQ8TBZ6 339 aaKnown RBP13.11□□□□□ -0.31
LTBP3-209ENST00000527792 NPRL2Q8WTW4 380 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 GTF3AQ92664 365 aaKnown RBP13.11□□□□□ -0.31
LTBP3-209ENST00000527792 PIGTQ969N2 578 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 SLC30A2Q9BRI3 323 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 ADAT1Q9BUB4 502 aaKnown RBP13.11□□□□□ -0.31
LTBP3-209ENST00000527792 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
LTBP3-209ENST00000527792 SLC22A4Q9H015 551 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 CBLN4Q9NTU7 201 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
LTBP3-209ENST00000527792 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 MPC1Q9Y5U8 109 aa13.11□□□□□ -0.31
LTBP3-209ENST00000527792 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.1□□□□□ -0.31
LTBP3-209ENST00000527792 FAM230AA0A1W2PPH8 454 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 H0YL77 283 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 MAGEB3O15480 346 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 MAS1P04201 325 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 HCKP08631 526 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 UCHL1P09936 223 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 ATF1P18846 271 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 RAB3AP20336 220 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 MMP15P51511 669 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 CNN3Q15417 329 aaKnown RBP13.1□□□□□ -0.31
LTBP3-209ENST00000527792 MST1LQ2TV78 715 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 GDPGP1Q6ZNW5 385 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 Q6ZR03 302 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 OR1M1Q8NGA1 313 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 KCTD7Q96MP8 289 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 MICU1Q9BPX6 476 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 CENPOQ9BU64 300 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 CHST5Q9GZS9 411 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
LTBP3-209ENST00000527792 RNF167Q9H6Y7 350 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 NEK6Q9HC98 313 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 NKIRAS2Q9NYR9 191 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 LAMP3Q9UQV4 416 aa13.1□□□□□ -0.31
LTBP3-209ENST00000527792 NOP16Q9Y3C1 178 aaKnown RBP13.1□□□□□ -0.31
LTBP3-209ENST00000527792 TRAV8-7A0A075B6U6 113 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 ZSCAN5BA6NJL1 495 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
LTBP3-209ENST00000527792 BMP4P12644 408 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 SRMP19623 302 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 TNFSF4P23510 183 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 FGF9P31371 208 aaPredicted RBP13.09□□□□□ -0.31
LTBP3-209ENST00000527792 UBE2V2Q15819 145 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 ELMOD3Q96FG2 381 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 RNF170Q96K19 258 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
LTBP3-209ENST00000527792 RTL8AQ9BWD3 113 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 TPK1Q9H3S4 243 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 MS4A5Q9H3V2 200 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
LTBP3-209ENST00000527792 DPPA5A6NC42 116 aa13.08□□□□□ -0.32
LTBP3-209ENST00000527792 F5H5P2 479 aa13.08□□□□□ -0.32
LTBP3-209ENST00000527792 MLNRO43193 412 aa13.08□□□□□ -0.32
LTBP3-209ENST00000527792 SULT1B1O43704 296 aa13.08□□□□□ -0.32
LTBP3-209ENST00000527792 GABARAPO95166 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms