RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 FAM216BQ8N7L0 139 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 C3orf56Q8N813 242 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 OR5T2Q8NGG2 359 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 PIGCQ92535 297 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 OR8B4Q96RC9 309 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 MICU1Q9BPX6 476 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 PCGF1Q9BSM1 259 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 TTTY10Q9BZA0 68 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 SIRPDQ9H106 197 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 WDR13Q9H1Z4 485 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 LAMP5Q9UJQ1 280 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 MPC1Q9Y5U8 109 aa8.63□□□□□ -1.03
PRPF40B-204ENST00000527253 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 ZAR1LA6NP61 321 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 SRRM5B3KS81 715 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 CLDN34H7C241 214 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 TMPRSS2O15393 492 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 SRSF10O75494 262 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 IGLV3-1P01715 115 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 RNASE1P07998 156 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 SELLP14151 372 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 MUC1P15941 1255 aaPredicted RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 DCTDP32321 178 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 POLR2IP36954 125 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 GNALP38405 381 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 MTNR1AP48039 350 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 TGM4P49221 684 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 GMFBP60983 142 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 ARF6P62330 175 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 ESRRGP62508 458 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 IL5RAQ01344 420 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 ROM1Q03395 351 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 MFGE8Q08431 387 aaPredicted RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 KDM4DQ6B0I6 523 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 DEGS2Q6QHC5 323 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 MEPCEQ7L2J0 689 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 TCEANCQ8N8B7 351 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 SCCPDHQ8NBX0 429 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 LY6G5BQ8NDX9 201 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 DNAJC9Q8WXX5 260 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 DUS3LQ96G46 650 aaKnown RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 RNF170Q96K19 258 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 WDFY2Q96P53 400 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 RAB3IPQ96QF0 476 aaPredicted RBP8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 PKP2Q99959 881 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 APOL4Q9BPW4 351 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 PBOV1Q9GZY1 135 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 GABARAPL1Q9H0R8 117 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 NIPAL2Q9H841 368 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 TRIM36Q9NQ86 728 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 SNTG1Q9NSN8 517 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 KIF17Q9P2E2 1029 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 PCDHGB1Q9Y5G3 927 aa8.62□□□□□ -1.03
PRPF40B-204ENST00000527253 A0A0U1RQV5 110 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 TMEM269A0A1B0GVZ9 245 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ACOD1A6NK06 481 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 G3V2T6 193 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 P2RY10O00398 339 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 HOXA3O43365 443 aaPredicted RBP8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 AKR7A2O43488 359 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 RHBDL1O75783 438 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 TOX4O94842 621 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 LIPFP07098 398 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 MICBQ29980 383 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ATPAF1Q5TC12 328 aaPredicted RBP8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 STUMQ69YW2 141 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ZDHHC23Q8IYP9 409 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF679Q8IYX0 411 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 OR10Z1Q8NGY1 313 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 TMEM163Q8TC26 289 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 OR51E1Q8TCB6 317 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 LRTOMTQ8WZ04 291 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ST8SIA4Q92187 359 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 IL4I1Q96RQ9 567 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 RTL8AQ9BWD3 113 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 TEX12Q9BXU0 123 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 OR51I2Q9H344 312 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ADGRL4Q9HBW9 690 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 GPR84Q9NQS5 396 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 KRT84Q9NSB2 600 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 HAO2Q9NYQ3 351 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 RPUSD1Q9UJJ7 312 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 AP4S1Q9Y587 144 aa8.61□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF816-ZNF321PA0A0X1KG74 233 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 TMEM210A6NLX4 147 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ANXA2P2A6NMY6 339 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF254O75437 659 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ECDO95905 644 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 TTRP02766 147 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 FASP25445 335 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 GPM6AP51674 278 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 DLX1P56177 255 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 PRB3Q04118 309 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 FOXL1Q12952 345 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 IKZF1Q13422 519 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 SNCBQ16143 134 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 DGUOKQ16854 277 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 CEP78Q5JTW2 689 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 GPR157Q5UAW9 335 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms