RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ISYNA1Q9NPH2 558 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 TRIM36Q9NQ86 728 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 IL19Q9UHD0 177 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 FBXO9Q9UK97 447 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 HHLA2Q9UM44 414 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF281Q9Y2X9 895 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 YLPM1P49750 1951 aaKnown RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 TRBV5-7A0A0A0MS05 114 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF816-ZNF321PA0A0X1KG74 233 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 PNMA8CA0A1B0GUJ8 204 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 A0A1B0GVI7 797 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 PLSCR5A0PG75 271 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MYL12BO14950 172 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 SSX4O60224 188 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 CDC14BO60729 498 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 BMP4P12644 408 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 DAOP14920 347 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 CPEP16870 476 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 EEF1B2P24534 225 aaKnown RBP9.09□□□□□ -0.95
NEDD8-205ENST00000527046 ART1P52961 327 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 SLC3A1Q07837 685 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MLLT11Q13015 90 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-205ENST00000527046 GPR50Q13585 617 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MED22Q15528 200 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 PCGF3Q3KNV8 242 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 PRAMEF6Q5VXH4 476 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 TMEM91Q6ZNR0 172 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 CELF2-AS1Q8N7Q2 184 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF676Q8N7Q3 588 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 CCDC54Q8NEL0 328 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MYCBPQ99417 103 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MGLLQ99685 303 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 SLC22A4Q9H015 551 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 TLNRD1Q9H1K6 362 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 GPR173Q9NS66 373 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 TREM2Q9NZC2 230 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 MPC1Q9Y5U8 109 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 NOTCH2Q04721 2471 aa9.09□□□□□ -0.95
NEDD8-205ENST00000527046 IGHV4-30-2A0A087WSY4 118 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 PQLC2LA1A4F0 135 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 ANKRD30BLA7E2S9 258 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 WNT9BO14905 357 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 MTRF1O75570 445 aaKnown RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 GPX5O75715 221 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 NRASP01111 189 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 LHBP01229 141 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 IGFBP3P17936 291 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 GIFP27352 417 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 MRPS11P82912 194 aaKnown RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 OR8G1Q15617 311 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 CEACAM21Q3KPI0 293 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 CEP78Q5JTW2 689 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 CLVS2Q5SYC1 327 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 SYT6Q5T7P8 510 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 LIPKQ5VXJ0 399 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF826PQ6ZT77 177 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 MOB3CQ70IA8 216 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 LYPD6Q86Y78 171 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 PHC2Q8IXK0 858 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 OR1M1Q8NGA1 313 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF420Q8TAQ5 688 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 Q8TCH9 128 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 RDH5Q92781 318 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 C10orf35Q96D05 121 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 NR1H4Q96RI1 486 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 PAPOLGQ9BWT3 736 aaKnown RBP9.08□□□□□ -0.96
NEDD8-205ENST00000527046 CHST5Q9GZS9 411 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 OR51I2Q9H344 312 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 ENPP5Q9UJA9 477 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 EDARQ9UNE0 448 aa9.08□□□□□ -0.96
NEDD8-205ENST00000527046 CSMD1Q96PZ7 3565 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 IGHV1-69-2A0A0G2JMI3 117 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 TNFRSF13BO14836 293 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ALX3O95076 343 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 CD37P11049 281 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 JUNBP17275 347 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ATF1P18846 271 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 SOX2P48431 317 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 TAS2R43P59537 309 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 RPS25P62851 125 aaKnown RBP9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF154Q13106 437 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 YIF1BQ5BJH7 314 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ARMCX4Q5H9R4 360 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 Q5PR19 223 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 FAM201AQ5SY85 155 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 UTS2BQ765I0 119 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF367Q7RTV3 350 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 COMMD2Q86X83 199 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 CALHM1Q8IU99 346 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 CIARTQ8N365 385 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-205ENST00000527046 SPERTQ8NA61 448 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 SCCPDHQ8NBX0 429 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 OR5A2Q8NGI9 324 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 OR51A2Q8NGJ7 313 aa9.07□□□□□ -0.96
NEDD8-205ENST00000527046 GPR148Q8TDV2 347 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms