RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 METTL21CQ5VZV1 264 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FBXW9Q5XUX1 488 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 H3F3CQ6NXT2 135 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PRMT9Q6P2P2 845 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4L9Q6RFH8 374 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ARL9Q6T311 187 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RTL4Q6ZR62 310 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PAGE2Q7Z2X7 111 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SPATA24Q86W54 205 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 UNC93AQ86WB7 457 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CD302Q8IX05 232 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BOD1L2Q8IYS8 172 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FAM71AQ8IYT1 594 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CMTM1Q8IZ96 169 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC7A5P1Q8MH63 180 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ZFP82Q8N141 532 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CSGALNACT2Q8N6G5 542 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 LINC00469Q8N7U9 141 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 C19orf18Q8NEA5 215 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OR5T1Q8NG75 326 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OR8G5Q8NG78 346 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OR13C9Q8NGT0 318 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 OR10J6PQ8NGY7 276 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 COQ8AQ8NI60 647 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 NDNFQ8TB73 568 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FAM110BQ8TC76 370 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 GLYATL2Q8WU03 294 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 LZICQ8WZA0 190 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RGP1Q92546 391 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 NRGNQ92686 78 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ISOC2Q96AB3 205 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MRGPRFQ96AM1 343 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CCDC127Q96BQ5 260 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 S100PBPQ96BU1 408 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BTN2A3PQ96KV6 586 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CCDC42Q96M95 316 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 HSD17B10Q99714 261 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TBL1YQ9BQ87 522 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RSG1Q9BU20 258 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 C1orf50Q9BV19 199 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 CHID1Q9BWS9 393 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SHCBP1LQ9BZQ2 653 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 UCK2Q9BZX2 261 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 NAA50Q9GZZ1 169 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FBXO44Q9H4M3 255 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM38AQ9H6F2 299 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 PARVGQ9HBI0 331 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TMBIM4Q9HC24 238 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MRM3Q9HC36 420 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 ABCB9Q9NP78 766 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MYOZ1Q9NP98 299 aaPredicted RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 MED4Q9NPJ6 270 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 IFT46Q9NQC8 304 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 TUBG2Q9NRH3 451 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RHBDL2Q9NX52 303 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC39A1Q9NY26 324 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC17A7Q9P2U7 560 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 DUX4Q9UBX2 424 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 VANGL2Q9ULK5 521 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC22A14Q9Y267 594 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC17A4Q9Y2C5 497 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 RBMX2Q9Y388 322 aaKnown RBP0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 V9GYQ6 96 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 V9GYY9 64 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 EVC2Q86UK5 1308 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 FRMPD3Q5JV73 1810 aa0.85□□□□□ -2.27
ECHDC1-219ENST00000526299 BRD4O60885 1362 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 CEMIPQ8WUJ3 1361 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 YEATS2Q9ULM3 1422 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 IGLV3-12A0A075B6K2 115 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 TRAV25A0A0B4J276 109 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 IGHV3OR16-9A0A0B4J2B5 98 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 IGHV1OR15-9A0A0B4J2B8 117 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 CENPVL3A0A0U1RRI6 287 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 TSPAN11A1L157 253 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 TVP23AA6NH52 213 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF705GA8MUZ8 300 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 EFCAB9A8MZ26 197 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 C16orf90A8MZG2 172 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SEC14L6B5MCN3 397 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SMKR1H3BMG3 65 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 RFXANKO14593 260 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC9A3R1O14745 358 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 TAAR5O14804 337 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 POLR1CO15160 346 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 PFDN6O15212 129 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SIVA1O15304 175 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 RBFOX2O43251 390 aaKnown RBP eCLIP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SSNA1O43805 119 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC16A7O60669 478 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 RAD1O60671 282 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 EIF1BO60739 113 aaKnown RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 NDUFS6O75380 124 aaKnown RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 CLDN11O75508 207 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 RP2O75695 350 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 TRAPPC6AO75865 159 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 AQP8O94778 261 aa0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 GLSO94925 669 aaPredicted RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 RPP14O95059 124 aaKnown RBP0.84□□□□□ -2.27
ECHDC1-219ENST00000526299 OR5F1O95221 314 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms