RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ASF1BQ9NVP2 202 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 PRR13Q9NZ81 148 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 GHRLQ9UBU3 117 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 OSGIN2Q9Y236 505 aa9.74□□□□□ -0.85
HDAC9-228ENST00000524023 MPTX1A8MV57 137 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 F5H5K5 113 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 K7ESF4 209 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 SDCBPO00560 298 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 NR2C1P13056 603 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 MSR1P21757 451 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 THBS4P35443 961 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 GUCA1AP43080 201 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 OR3A2P47893 321 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 SNU13P55769 128 aaKnown RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 CSNK2A1P68400 391 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 NAAAQ02083 359 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 ANKRD55Q3KP44 614 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 PHYHD1Q5SRE7 291 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 C10orf128Q5T292 105 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 Q7L0L9 218 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 BAP18Q8IXM2 172 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 GTPBP8Q8N3Z3 284 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 CSNK2A3Q8NEV1 391 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 GJC3Q8NFK1 279 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 NPRL2Q8WTW4 380 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 SHDQ96IW2 340 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 NELFAQ9H3P2 528 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 A0A0U1RQV5 110 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 OR5H15A6NDH6 313 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 STMND1H3BQB6 276 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 HTR3BO95264 441 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 LYL1P12980 280 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 BLVRBP30043 206 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 SLC6A9P48067 706 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 TAS2R46P59540 309 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 ENDOGQ14249 297 aaKnown RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 PCOLCEQ15113 449 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 UBE2V2Q15819 145 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 PRSS54Q6PEW0 395 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 DTX1Q86Y01 620 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 BHLHE23Q8NDY6 225 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 MAFIPQ8WZ33 124 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 MICU1Q9BPX6 476 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 AIFM2Q9BRQ8 373 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 PECRQ9BY49 303 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 NKX6-2Q9C056 277 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM100Q9NV29 134 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 OCIAD1Q9NX40 245 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 OR5AC2Q9NZP5 309 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 V9GYS6 101 aa9.73□□□□□ -0.85
HDAC9-228ENST00000524023 A0A087WZY1 265 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 SIGLEC6O43699 453 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 DHRS3O75911 302 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 PLATP00750 562 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 HPNP05981 417 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 CELA2AP08217 269 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 CD79AP11912 226 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 RPS2P15880 293 aaKnown RBP9.72□□□□□ -0.85
HDAC9-228ENST00000524023 FAHP16930 419 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 SERPINA2P20848 420 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 GLRA1P23415 457 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF133P52736 654 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-228ENST00000524023 AIMP2Q13155 320 aaKnown RBP9.72□□□□□ -0.85
HDAC9-228ENST00000524023 RSPO1Q2MKA7 263 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-228ENST00000524023 FAM74A3Q4VXF1 159 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 FOXL2NBQ6ZUU3 175 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 NABP1Q96AH0 204 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 OR10C1Q96KK4 312 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF385AQ96PM9 386 aaKnown RBP9.72□□□□□ -0.85
HDAC9-228ENST00000524023 SLC6A15Q9H2J7 730 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 EHFQ9NZC4 300 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 WNT16Q9UBV4 365 aa9.72□□□□□ -0.85
HDAC9-228ENST00000524023 IGHV3-15A0A0B4J1V0 119 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 TMEM218A2RU14 115 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 ATG12O94817 140 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 CYC1P08574 325 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 FCGR2AP12318 317 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 CXCL12P48061 93 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 HIST1H3AP68431 136 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 ZNF169Q14929 603 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-228ENST00000524023 NKAPLQ5M9Q1 402 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 HIST2H3PS2Q5TEC6 136 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 NSUN5P2Q63ZY6 315 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 Q6ZSR3 168 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 SLC16A14Q7RTX9 510 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 LRRC18Q8N456 261 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 PAQR8Q8TEZ7 354 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 RNF141Q8WVD5 230 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 PP6455Q8WZ26 134 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 TM2D1Q9BX74 207 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 CHST5Q9GZS9 411 aa9.71□□□□□ -0.85
HDAC9-228ENST00000524023 METTL8Q9H825 291 aaKnown RBP9.71□□□□□ -0.85
HDAC9-228ENST00000524023 LOC102723996A0A087X1L8 192 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 SERPINE3A8MV23 424 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms