RNA–Protein interactions for RNA: ENST00000523663.5

ITGB2-223, Transcript of integrin subunit beta 2, human

TSL 5

Gene ITGB2, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-223	ENST00000523663	C14orf119	Q9NWQ9	140 aa		13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	TREM2	Q9NZC2	230 aa		13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	PPP1R3C	Q9UQK1	317 aa		13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	CACNG2	Q9Y698	323 aa		13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	HIVEP1	P15822	2718 aa		13.3	□□□□□ -0.28
ITGB2-223	ENST00000523663	ZAN	Q9Y493	2812 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CR1	P17927	2039 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	IGHV4-30-2	A0A087WSY4	118 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	NDUFS8	O00217	210 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	LMX1B	O60663	402 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	RP2	O75695	350 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CDH15	P55291	814 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	SLC3A1	Q07837	685 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	SPHAR	Q15513	63 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	MED22	Q15528	200 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CEP78	Q5JTW2	689 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CLVS2	Q5SYC1	327 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	PLCXD3	Q63HM9	321 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	SPNS3	Q6ZMD2	512 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	KRT74	Q7RTS7	529 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	TGIF2LY	Q8IUE0	185 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CELF2-AS1	Q8N7Q2	184 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	OR51A4	Q8NGJ6	313 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	RPS4Y2	Q8TD47	263 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	C10orf105	Q8TEF2	133 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	OR5P3	Q8WZ94	311 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	CCL17	Q92583	94 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	ITPKC	Q96DU7	683 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	SMIM19	Q96E16	107 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	PIMREG	Q9BSJ6	248 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	RTL8A	Q9BWD3	113 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	GCM1	Q9NP62	436 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	LSM2	Q9Y333	95 aa	Known RBP	13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	MED13L	Q71F56	2210 aa		13.29	□□□□□ -0.28
ITGB2-223	ENST00000523663	VPS13C	Q709C8	3753 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	LOC100289279	A0A1B0GTE1	492 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	PNMA8C	A0A1B0GUJ8	204 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	ANKRD61	A6NGH8	418 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	TRIM64	A6NGJ6	449 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	TRIM64B	A6NI03	449 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	NRAS	P01111	189 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	GRP	P07492	148 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	ZNF20	P17024	532 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	GIF	P27352	417 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	GATA4	P43694	442 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	MAP2K4	P45985	399 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	DOC2B	Q14184	412 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	PRAMEF6	Q5VXH4	476 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	TMEM42	Q69YG0	159 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	DMKN	Q6E0U4	476 aa	Predicted RBP	13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	MOB3C	Q70IA8	216 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	MOGAT3	Q86VF5	341 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	TSEN15	Q8WW01	171 aa	Known RBP	13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	GHSR	Q92847	366 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	RNF170	Q96K19	258 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	OR5M11	Q96RB7	305 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	GPR173	Q9NS66	373 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	UFSP2	Q9NUQ7	469 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	F8	P00451	2351 aa		13.28	□□□□□ -0.28
ITGB2-223	ENST00000523663	YLPM1	P49750	1951 aa	Known RBP	13.27	□□□□□ -0.28
ITGB2-223	ENST00000523663		A6NLC8	198 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	CLDN25	C9JDP6	229 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	PPIH	O43447	177 aa	Known RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	MRPS14	O60783	128 aa	Known RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	SLC25A16	P16260	332 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	CEL	P19835	753 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	TMEM33	P57088	247 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	BDH1	Q02338	343 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	HNRNPA0	Q13151	305 aa	Known RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	RIN1	Q13671	783 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	MPPED2	Q15777	294 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	DMRTC1	Q5HYR2	192 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	KCTD8	Q6ZWB6	473 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	GPR148	Q8TDV2	347 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	HPSE2	Q8WWQ2	592 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	RGP1	Q92546	391 aa	Predicted RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	FGGY	Q96C11	551 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	C10orf35	Q96D05	121 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	ADAT3	Q96EY9	351 aa	Predicted RBP	13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	CHST5	Q9GZS9	411 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	FN3KRP	Q9HA64	309 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	TMEM106B	Q9NUM4	274 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	DHDH	Q9UQ10	334 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	LRCH1	Q9Y2L9	728 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	ZNF281	Q9Y2X9	895 aa		13.27	□□□□□ -0.29
ITGB2-223	ENST00000523663	OR5B21	A6NL26	309 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	LRRC30	A6NM36	301 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	IFNL4	K9M1U5	179 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	GATB	O75879	557 aa	Known RBP	13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	PTBP3	O95758	552 aa	Known RBP	13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	SERPINA3	P01011	423 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	THBS2	P35442	1172 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	NR4A2	P43354	598 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	GPR6	P46095	362 aa	Predicted RBP	13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	GPM6A	P51674	278 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	GNG3	P63215	75 aa		13.26	□□□□□ -0.29
ITGB2-223	ENST00000523663	ACSM1	Q08AH1	577 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms