RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SLC35G3Q8N808 338 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF514Q96K75 400 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 SCGB3A2Q96PL1 93 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MACROD1Q9BQ69 325 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 NIPSNAP3BQ9BS92 247 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 PRR13Q9NZ81 148 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CGGBP1Q9UFW8 167 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 LSM7Q9UK45 103 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 DHDHQ9UQ10 334 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 V9GYS6 101 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 H3BQ15 152 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 GEMIN2O14893 280 aaKnown RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 MMP23AO75900 390 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 SRP19P09132 144 aaKnown RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 WNT2P09544 360 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 PI3P19957 117 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 APLNRP35414 380 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 Q7L0L9 218 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 COX18Q8N8Q8 333 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 STT3BQ8TCJ2 826 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 DOK4Q8TEW6 326 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 NOTCH4Q99466 2003 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 A0A1W2PS29 197 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 TCF21O43680 179 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 GALTP07902 379 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 NPSP0C0P6 89 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 LMAN2Q12907 356 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 NOGQ13253 232 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF101Q8IZC7 436 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 FAM89BQ8N5H3 189 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 GVQW1Q8N7I0 195 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 POC1BQ8TC44 478 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 FRZBQ92765 325 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 UBE2ZQ9H832 354 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 SRPK3Q9UPE1 567 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 CHTOPQ9Y3Y2 248 aaKnown RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 DOCK3Q8IZD9 2030 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 SCN3AQ9NY46 2000 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 IGKV1D-42A0A075B6H8 117 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 RAMP1O60894 148 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 LEFTY1O75610 366 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 AHSA1O95433 338 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 IFNA21P01568 189 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ASAH2BP0C7U1 165 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 PGA4P0DJD7 388 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 PGA5P0DJD9 388 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 AKT2P31751 481 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 RBMXP38159 391 aaKnown RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 OR3A2P47893 321 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM33P57088 247 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 VAMP2P63027 116 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 H3F3AP84243 136 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 IAH1Q2TAA2 248 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ARMC6Q6NXE6 501 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 CRIP3Q6Q6R5 217 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 SLC24A5Q71RS6 500 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
CSMD1-213ENST00000523488 FAM185AQ8N0U4 392 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 RAB42Q8N4Z0 105 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 OR51A4Q8NGJ6 313 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ADAMTS18Q8TE60 1221 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 METTL21AQ8WXB1 218 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 RASD2Q96D21 266 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ABHD14BQ96IU4 210 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 TRIM2Q9C040 744 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 ASCL3Q9NQ33 180 aa7.43□□□□□ -1.22
CSMD1-213ENST00000523488 CLEC18AA5D8T8 446 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 NKX2-2O95096 273 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 HIST1H1TP22492 207 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-213ENST00000523488 TUBG1P23258 451 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CST5P28325 142 aaPredicted RBP7.42□□□□□ -1.22
CSMD1-213ENST00000523488 FKBP1BP68106 108 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 GPR157Q5UAW9 335 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CLEC18CQ8NCF0 446 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 BHLHE23Q8NDY6 225 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 FAM46BQ96A09 425 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 FGGYQ96C11 551 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 IMMP2LQ96T52 175 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 PCGF1Q9BSM1 259 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 IL21Q9HBE4 155 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 DNAH12Q6ZR08 3092 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 OR6A2O95222 327 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 BPNT1O95861 308 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 PPBPP02775 128 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CST2P09228 141 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 PSMB5P28074 263 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ECI1P42126 302 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CDKN1BP46527 198 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 CCR4P51679 360 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ANKRD55Q3KP44 614 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM31Q5JXX7 168 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM225Q6GV28 225 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ULK3Q6PHR2 472 aa7.42□□□□□ -1.22
CSMD1-213ENST00000523488 ARHGEF39Q8N4T4 335 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms