RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ZNF879B4DU55 563 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 PSMD9O00233 223 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 DVL1O14640 695 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 MITFO75030 526 aaPredicted RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 ECDO95905 644 aaPredicted RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 DCTDP32321 178 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 MAP2K3P46734 347 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 BPIFB3P59826 476 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 ROM1Q03395 351 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 POU4F2Q12837 409 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 ZNF829Q3KNS6 432 aaPredicted RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 KDM4DQ6B0I6 523 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 KCTD8Q6ZWB6 473 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 ZDHHC23Q8IYP9 409 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 TCEANCQ8N8B7 351 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 DUS3LQ96G46 650 aaKnown RBP13.46□□□□□ -0.25
CLN8-206ENST00000523237 RNF170Q96K19 258 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 HIST1H2AAQ96QV6 131 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 OR8B4Q96RC9 309 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 GABARAPL1Q9H0R8 117 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 COPS3Q9UNS2 423 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 ANK2Q01484 3957 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 ZNF816-ZNF321PA0A0X1KG74 233 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 SRRM5B3KS81 715 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 P2RY10O00398 339 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 TOX4O94842 621 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 RIDAP52758 137 aaKnown RBP13.45□□□□□ -0.26
CLN8-206ENST00000523237 FAM76BQ5HYJ3 339 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 WDR38Q5JTN6 314 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 AADACL4Q5VUY2 407 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 METTL11BQ5VVY1 283 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 BTN2A1Q7KYR7 527 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 SLC36A1Q7Z2H8 476 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 COMMD2Q86X83 199 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 OR10Z1Q8NGY1 313 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 TMEM163Q8TC26 289 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 ST8SIA4Q92187 359 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 SLC25A28Q96A46 364 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 C1orf147Q96MC9 270 aaPredicted RBP13.45□□□□□ -0.26
CLN8-206ENST00000523237 MNTQ99583 582 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 TTTY10Q9BZA0 68 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 PBOV1Q9GZY1 135 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 DNAJB11Q9UBS4 358 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
CLN8-206ENST00000523237 PRR32B1ATL7 298 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.44□□□□□ -0.26
CLN8-206ENST00000523237 CLDN34H7C241 214 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 M0R129 80 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 CIB2O75838 187 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 SFTPBP07988 381 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 RNASE1P07998 156 aaKnown RBP13.44□□□□□ -0.26
CLN8-206ENST00000523237 HKR1P10072 659 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 EPHA2P29317 976 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 ACTR3P61158 418 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 EFNB1P98172 346 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 FOXL1Q12952 345 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 AWAT1Q58HT5 328 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 BRD3OSQ6XYD6 125 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
CLN8-206ENST00000523237 GID4Q8IVV7 300 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 SLC35F2Q8IXU6 374 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 SCCPDHQ8NBX0 429 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 HPSE2Q8WWQ2 592 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 LRTOMTQ8WZ04 291 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 RPL3LQ92901 407 aaKnown RBP13.44□□□□□ -0.26
CLN8-206ENST00000523237 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 CCL13Q99616 98 aa13.44□□□□□ -0.26
CLN8-206ENST00000523237 NUFIP1Q9UHK0 495 aaKnown RBP13.44□□□□□ -0.26
CLN8-206ENST00000523237 ZNF670-ZNF695F2Z2N8 137 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 FCN3O75636 299 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 MMP9P14780 707 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 GPM6AP51674 278 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 CXCR4P61073 352 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 PDCD1Q15116 288 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 SLC9A3R2Q15599 337 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 CEACAM21Q3KPI0 293 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 ZNF322Q6U7Q0 402 aaPredicted RBP13.43□□□□□ -0.26
CLN8-206ENST00000523237 KRT74Q7RTS7 529 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 THAP5Q7Z6K1 395 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 OR51E1Q8TCB6 317 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 SEH1LQ96EE3 360 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 FAM71F1Q96KD3 344 aaPredicted RBP13.43□□□□□ -0.26
CLN8-206ENST00000523237 IL4I1Q96RQ9 567 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 CIB1Q99828 191 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 DNTTIP1Q9H147 329 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 MOB1AQ9H8S9 216 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 GPR84Q9NQS5 396 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 CLN6Q9NWW5 311 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 HAO2Q9NYQ3 351 aa13.43□□□□□ -0.26
CLN8-206ENST00000523237 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
CLN8-206ENST00000523237 SOX21Q9Y651 276 aaPredicted RBP13.43□□□□□ -0.26
CLN8-206ENST00000523237 MDFIC2A0A1B0GVS7 189 aa13.42□□□□□ -0.26
CLN8-206ENST00000523237 NKX6-3A6NJ46 265 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms