RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 RAC3P60763 192 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 HGFACQ04756 655 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 LPCAT3Q6P1A2 487 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FAM89BQ8N5H3 189 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PNLDC1Q8NA58 520 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 URM1Q9BTM9 101 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SDHAF2Q9NX18 166 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PADI1Q9ULC6 663 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FLVCR1Q9Y5Y0 555 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 AHCTF1Q8WYP5 2266 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FOXI3A8MTJ6 420 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 B4E171 279 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CXCL13O43927 109 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PATE4P0C8F1 98 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 UBBP0CG47 229 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TSPAN7P41732 249 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MRPS34P82930 218 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 BEX5Q5H9J7 111 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DCAF12Q5T6F0 453 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FAM27BQ5VT28 67 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TMEM65Q6PI78 240 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ESX1Q8N693 406 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TERB2Q8NHR7 220 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CT55Q8WUE5 264 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ALKBH3Q96Q83 286 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PHB2Q99623 299 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MICU1Q9BPX6 476 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CRLF2Q9HC73 371 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FBXO9Q9UK97 447 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TNFSF18Q9UNG2 199 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 LOXL2Q9Y4K0 774 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PINLYPA6NC86 204 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MFSD2BA6NFX1 497 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 HLA-GP17693 338 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PI3P19957 117 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ACKR3P25106 362 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CARD18P57730 90 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ARFRP1Q13795 201 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PNLIPRP3Q17RR3 467 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 WIPI1Q5MNZ9 446 aaPredicted RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SIGIRRQ6IA17 410 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF774Q6NX45 483 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TMEM230Q96A57 120 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SGK3Q96BR1 496 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OCSTAMPQ9BR26 566 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ST6GALNAC5Q9BVH7 336 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PCDHGA1Q9Y5H4 931 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 KCNMB2Q9Y691 235 aa9.41□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GJE1A6NN92 205 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF716A6NP11 495 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 EEF1E1-BLOC1S5C9J1V9 151 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 HPNP05981 417 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CRYGSP22914 178 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ACP1P24666 158 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 BLVRBP30043 206 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CLDN15P56746 228 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FGL1Q08830 312 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CHAF1BQ13112 559 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 VAX1Q5SQQ9 334 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FAHD2BQ6P2I3 314 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 Q6ZSR3 168 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SUN5Q8TC36 379 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PP6455Q8WZ26 134 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FAHD2AQ96GK7 314 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SF3B5Q9BWJ5 86 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 C5orf66Q9H5L9 145 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ELL3Q9HB65 397 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GPR173Q9NS66 373 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 NCOR1O75376 2440 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SDCBPO00560 298 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 KCNAB3O43448 404 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SGCEO43556 437 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SYNGR3O43761 229 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DUS4LO95620 317 aaKnown RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SLC25A4P12235 298 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 B4GALT1P15291 398 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 AMY2BP19961 511 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 AGTR1P30556 359 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ALDH3B1P43353 468 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 BAMBIQ13145 260 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ACER2Q5QJU3 275 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 JMJD6Q6NYC1 403 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DEFB123Q8N688 67 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR5M9Q8NGP3 310 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR13G1Q8NGZ3 307 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 HAS2Q92819 552 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SPTSSAQ969W0 71 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ADGRG7Q96K78 797 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PECRQ9BY49 303 aa9.4□□□□□ -0.9
RAB11FIP1-204ENST00000522774 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms