RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FGF11Q92914 225 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 AKR1E2Q96JD6 320 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 MBD1Q9UIS9 605 aaPredicted RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 PCOLCE2Q9UKZ9 415 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 CSAG2Q9Y5P2 127 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 KPTNQ9Y664 436 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 A0A1W2PR80 420 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 SLC17A2O00624 439 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 SPRY1O43609 319 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 CDC14BO60729 498 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 GALNSP34059 522 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 SSTP61278 116 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 OR10K2Q6IF99 312 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 BTNL3Q6UXE8 466 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 ASB5Q8WWX0 329 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 MCHR2Q969V1 340 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 BCORQ6W2J9 1755 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 PNLIPP16233 465 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 KIAA0040Q15053 153 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 TMEM179BQ7Z7N9 219 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 RTN4IP1Q8WWV3 396 aaPredicted RBP14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 ADAM19Q9H013 955 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 WDR54Q9H977 334 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 PLEKHA2Q9HB19 425 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 SMCHD1A6NHR9 2005 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 TRAV1-2A0A0B4J238 106 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 OIP5O43482 229 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 TAGLN2P37802 199 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 ACOT7LQ6ZUV0 252 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 RBPMSQ93062 196 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 POM121L2Q96KW2 1035 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 DOK1Q99704 481 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 CABIN1Q9Y6J0 2220 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 B4E171 279 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 AGFG2O95081 481 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 PSMB6P28072 239 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 TSPAN7P41732 249 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 SF3B5Q9BWJ5 86 aaKnown RBP14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 GSX2Q9BZM3 304 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 GAL3ST2Q9H3Q3 398 aa14.53□□□□□ -0.08
PCDHA3-201ENST00000522353 OR2M5A3KFT3 312 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 ANGPTL7O43827 346 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 DHRS3O75911 302 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 CD160O95971 181 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 CEACAM3P40198 252 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 CXorf67Q86X51 503 aaPredicted RBP14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 SAT2Q96F10 170 aaPredicted RBP14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 ECM29Q5VYK3 1845 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 SMLR1H3BR10 107 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 PRDX4Q13162 271 aa14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF764Q96H86 408 aaPredicted RBP14.52□□□□□ -0.08
PCDHA3-201ENST00000522353 NGFP01138 241 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 CA6P23280 308 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 ZBTB25P24278 435 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 ZNF774Q6NX45 483 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 C16orf47Q6ZP98 133 aaPredicted RBP14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 BAGE3Q86Y29 109 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 BAGE2Q86Y30 109 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 SKA3Q8IX90 412 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 OR10AD1Q8NGE0 317 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 MOB3AQ96BX8 217 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 CEP290O15078 2479 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 A0A1W2PQD3 144 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 hADV38S2A0JD32 116 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 CDX4O14627 284 aaPredicted RBP14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 MBP02144 154 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 HRH1P35367 487 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 PPP1CBP62140 327 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 FMODQ06828 376 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 ISXQ2M1V0 245 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 STUMQ69YW2 141 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 CYSLTR2Q9NS75 346 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 TRAPPC4Q9Y296 219 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.09
PCDHA3-201ENST00000522353 E5RGE8 158 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 RER1O15258 196 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 FUCA1P04066 466 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 ACOT6Q3I5F7 207 aaPredicted RBP14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 DCAF10Q5QP82 559 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 NHLRC1Q6VVB1 395 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 MRGPREQ86SM8 312 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 PCNPQ8WW12 178 aaKnown RBP14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 TAAR3PQ9P1P4 343 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 NSG2Q9Y328 171 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 SNRPGP15A8MWD9 76 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 SCGB1D1O95968 90 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 OXA1LQ15070 435 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 AVPI1Q5T686 147 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 SOX7Q9BT81 388 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 HRASP01112 189 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 METTL15P1P0C7V9 234 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 WNT3P56703 355 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 PIGPP57054 158 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 TMEM104Q8NE00 496 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 TMEM56Q96MV1 263 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 MED9Q9NWA0 146 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 A0A1W2PQF6 199 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 OR5B21A6NL26 309 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms