RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 PLA2G2FQ9BZM2 168 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 TWSG1Q9GZX9 223 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 FN3KRPQ9HA64 309 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 CBR3O75828 277 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 GPANK1O95872 356 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 HPXP02790 462 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 MYBPHQ13203 477 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 SPANXN5Q5MJ07 72 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 KCNE4Q8WWG9 221 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 TSPAN32Q96QS1 320 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 NDRG3Q9UGV2 375 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 TMEM272A0A1B0GTI8 110 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 BTBD17A6NE02 478 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 SSSCA1O60232 199 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 ACKR3P25106 362 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
SYNPO-205ENST00000522122 A0A096LPE4 126 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 B4GALT1P15291 398 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
SYNPO-205ENST00000522122 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 LCN15Q6UWW0 184 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 CXorf58Q96LI9 332 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 VN1R1Q9GZP7 353 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF768Q9H5H4 540 aaKnown RBP12.36□□□□□ -0.43
SYNPO-205ENST00000522122 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 IGHV5-51A0A0C4DH38 117 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 EPPINO95925 133 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 PRSS27Q9BQR3 290 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 UBE2ZQ9H832 354 aaPredicted RBP12.36□□□□□ -0.43
SYNPO-205ENST00000522122 PCDHB10Q9UN67 800 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 A0A0B4J293 547 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 TMEM229AB2RXF0 380 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 H7BYZ3 331 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 ARR3P36575 388 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
SYNPO-205ENST00000522122 SPEM1Q8N4L4 309 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF485Q8NCK3 441 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 RNF150Q9ULK6 438 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 ANGPTL7O43827 346 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 CD96P40200 585 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 FAM60AQ9NP50 221 aa12.36□□□□□ -0.43
SYNPO-205ENST00000522122 PPP5D1E7EU14 171 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 WNT11O96014 354 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 CLDN15P56746 228 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF808Q8N4W9 903 aaPredicted RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 RIMS4Q9H426 269 aaPredicted RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 TPRP12270 2363 aaKnown RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SHISA8B8ZZ34 492 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ADAM10O14672 748 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 PTP4A3O75365 173 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 MYF5P13349 255 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 RAB1AP62820 205 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 OR8G1Q15617 311 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 OR2W3Q7Z3T1 314 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ZFP62Q8NB50 900 aaPredicted RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SUCNR1Q9BXA5 334 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 TMPRSS13Q9BYE2 586 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 MAGT1Q9H0U3 335 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ZFP64Q9NPA5 681 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 DNAJC13O75165 2243 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 C2CD4DB7Z1M9 353 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 TNFSF11O14788 317 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SH2D1BO14796 132 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 PIAS2O75928 621 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 GP1BAP07359 652 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 FPR2P25090 351 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 HAAOP46952 286 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 OR2B8PP59922 312 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 Q5BKY6 102 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SLC35G3Q8N808 338 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 BVESQ8NE79 360 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 CTLA4P16410 223 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SMAD4Q13485 552 aaKnown RBP12.35□□□□□ -0.43
SYNPO-205ENST00000522122 PPP1R1AQ13522 171 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 LHX4Q969G2 390 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 SPSB1Q96BD6 273 aa12.35□□□□□ -0.43
SYNPO-205ENST00000522122 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms