RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MRPL15Q9P015 296 aaKnown RBP18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 SLC7A11Q9UPY5 501 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 CMAHPQ9Y471 501 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 MYO18BQ8IUG5 2567 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 FAM230AA0A1W2PPH8 454 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 SHISA9B4DS77 424 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 AIPO00170 330 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 SIAH2O43255 324 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 ALDOBP05062 364 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 ZNF250P15622 560 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 KITLGP21583 273 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 PRKACBP22694 351 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 KLF3P57682 345 aaPredicted RBP18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 ZDHHC23Q8IYP9 409 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 SPSB1Q96BD6 273 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 FOXRED1Q96CU9 486 aaPredicted RBP18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 TECTBQ96PL2 329 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 HIST1H2AAQ96QV6 131 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 SYT3Q9BQG1 590 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 MPC1Q9Y5U8 109 aa18.29■□□□□ 0.52
R3HCC1-208ENST00000522012 DEFB108AA8MXU0 73 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 CLPXO76031 633 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 PRF1P14222 555 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 ZNF93P35789 620 aaPredicted RBP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 SELENOVP59797 346 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 KRT74Q7RTS7 529 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 RNF144BQ7Z419 303 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 DMRTC2Q8IXT2 367 aaPredicted RBP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 OR8G5Q8NG78 346 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 DVL3Q92997 716 aaPredicted RBP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 GPER1Q99527 375 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 NXF2Q9GZY0 626 aaKnown RBP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 MMP27Q9H306 513 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 RNF115Q9Y4L5 304 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 A0A0B4J203 849 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 BMXP51813 675 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 CLDN12P56749 244 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 SRSF1Q07955 248 aaKnown RBP eCLIP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 RAB11BQ15907 218 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 ZNF671Q8TAW3 534 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 FAM222BQ8WU58 562 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 BORCS8Q96FH0 119 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 SORCS2Q96PQ0 1159 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 METTL17Q9H7H0 456 aaPredicted RBP18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 ZNF442Q9H7R0 627 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 TMEM100Q9NV29 134 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 COMMD3Q9UBI1 195 aa18.28■□□□□ 0.52
R3HCC1-208ENST00000522012 A0A075B6Q4 140 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 VSTM5A8MXK1 200 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 SLC17A2O00624 439 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 PLAUP00749 431 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 IGHV3-13P01766 116 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 CD37P11049 281 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 THBS2P35442 1172 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 FUT6P51993 359 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 MTCP1P56278 107 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 P2RY14Q15391 338 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 KISS1Q15726 138 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 CEACAM21Q3KPI0 293 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 CDH26Q8IXH8 852 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 SSC4DQ8WTU2 575 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 ACOT12Q8WYK0 555 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 NEUROG1Q92886 237 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 MRPL24Q96A35 216 aaKnown RBP18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 RFT1Q96AA3 541 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 KCTD12Q96CX2 325 aaKnown RBP18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 HS3ST6Q96QI5 342 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 MRPL37Q9BZE1 423 aaKnown RBP18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 CNTD2Q9H8S5 307 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 SMURF1Q9HCE7 757 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 STEAP1Q9UHE8 339 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 A3GALT2U3KPV4 340 aa18.27■□□□□ 0.51
R3HCC1-208ENST00000522012 HIVEP3Q5T1R4 2406 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 DIDO1Q9BTC0 2240 aaKnown RBP18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 PRR14LQ5THK1 2151 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 RGS5O15539 181 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 PAHP00439 452 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 OR4A8P0C604 315 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 SNRPBP14678 240 aaKnown RBP18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 HTR2CP28335 458 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 C1orf100Q5SVJ3 147 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 MZT2AQ6P582 158 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 LHFPL2Q6ZUX7 228 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 LYPD6Q86Y78 171 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 OR6M1Q8NGM8 313 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 OR8S1Q8NH09 359 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 OR5P3Q8WZ94 311 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 RNF170Q96K19 258 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 UQCC2Q9BRT2 126 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 LIN7BQ9HAP6 207 aa18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 MYEF2Q9P2K5 600 aaKnown RBP18.26■□□□□ 0.51
R3HCC1-208ENST00000522012 IGLV3-9A0A075B6K5 115 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 E7EQL1 145 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 CTDSP2O14595 271 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 IGFBP2P18065 325 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 LOXP28300 417 aaPredicted RBP18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 RBP2P50120 134 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 GPM6AP51674 278 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 ATP1B3P54709 279 aa18.25■□□□□ 0.51
R3HCC1-208ENST00000522012 OR8G1Q15617 311 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms