RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 A0A0B4J2E0 115 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 A0A0U1RQV1 116 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 H3BN98 237 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 H3BQF6 201 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ATP8B1O43520 1251 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 XRCC2O43543 280 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF207O43670 478 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 GCM2O75603 506 aaPredicted RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CATP04040 527 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 BCHEP06276 602 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CD3GP09693 182 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 STAG3L2P0CL84 134 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 PSG2P11465 335 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TCN2P20062 427 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 GABRR2P28476 465 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CD70P32970 193 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 LONP1P36776 959 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 POLR2IP36954 125 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CEACAM3P40198 252 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ETV1P50549 477 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 HADHBP55084 474 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TAS2R39P59534 338 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TPM4P67936 248 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF33AQ06730 810 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 SMARCB1Q12824 385 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 PNOCQ13519 176 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ALX1Q15699 326 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 C2orf83Q53S99 150 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 HES5Q5TA89 166 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 SLC25A25Q6KCM7 469 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 SLC35D2Q76EJ3 337 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 HORMAD1Q86X24 394 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 FAM71AQ8IYT1 594 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 VKORC1L1Q8N0U8 176 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 GATSQ8NAP1 163 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CHST4Q8NCG5 386 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 DUSP18Q8NEJ0 188 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TCP10LQ8TDR4 215 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 PIH1D2Q8WWB5 315 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TFGQ92734 400 aaPredicted RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 SGTBQ96EQ0 304 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF799Q96GE5 643 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 C18orf15Q96N68 181 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZIM3Q96PE6 472 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 MICU1Q9BPX6 476 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 HDHD3Q9BSH5 251 aaPredicted RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 SLC25A2Q9BXI2 301 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 GAL3ST2Q9H3Q3 398 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 KIR3DX1Q9H7L2 352 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ISYNA1Q9NPH2 558 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ADAM22Q9P0K1 906 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 NUFIP1Q9UHK0 495 aaKnown RBP2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 CELA1Q9UNI1 258 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 ROBO3Q96MS0 1386 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 RALGAPA2Q2PPJ7 1873 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 TRIP11Q15643 1979 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 PHIPQ8WWQ0 1821 aa2.17□□□□□ -2.06
HMGN1P28-201ENST00000521340 DOCK1Q14185 1865 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 TRBV6-6A0A0A6YYG2 114 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 IGHV3OR16-9A0A0B4J2B5 98 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 IGHV5-51A0A0C4DH38 117 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 GSTTP1A0A1W2PQM5 241 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CIB4A0PJX0 185 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 C11orf94C9JXX5 98 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ANKRD65E5RJM6 399 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 H7C0C1 242 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 PLPP1O14494 284 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 SOCS1O15524 211 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 STX10O60499 249 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 MBP02144 154 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 RETP07949 1114 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 PRPS2P11908 318 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF823P16415 610 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 IVDP26440 423 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 PFN2P35080 140 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CSNK1A1P48729 337 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 PPP1CBP62140 327 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 QPRTQ15274 297 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 TPRG1LQ5T0D9 272 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 AVPI1Q5T686 147 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CYB5R2Q6BCY4 276 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ULK3Q6PHR2 472 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR2W3Q7Z3T1 314 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OAFQ86UD1 273 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 MKXQ8IYA7 352 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 DAW1Q8N136 415 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF786Q8N393 782 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 ARIH2OSQ8N7S6 290 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 MNS1Q8NEH6 495 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR5T3Q8NGG3 340 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 APH1BQ8WW43 257 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR8D1Q8WZ84 308 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 RGP1Q92546 391 aaPredicted RBP2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CIDECQ96AQ7 238 aaPredicted RBP2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR2A5Q96R48 311 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 CALN1Q9BXU9 219 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 TPK1Q9H3S4 243 aa2.16□□□□□ -2.06
HMGN1P28-201ENST00000521340 C12orf10Q9HB07 376 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms