RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 IGHMP01871 453 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 PPP3CBP16298 524 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 ARF1P84077 181 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 SLC23A3Q6PIS1 610 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 C6orf201Q7Z4U5 140 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 IMMP1LQ96LU5 166 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 FAM173AQ9BQD7 235 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 SLC26A1Q9H2B4 701 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 B3GNT2Q9NY97 397 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 TMEM200CA6NKL6 621 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 SLC33A1O00400 549 aaPredicted RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 CDC14BO60729 498 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 SNAPC5O75971 98 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 PRH1P02810 166 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 RFPL3SP0C7P2 107 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 HIST1H1DP16402 221 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 CYCSP99999 105 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 SSBP1Q04837 148 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 PPP1R1AQ13522 171 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 STPG1Q5TH74 334 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 PP6455Q8WZ26 134 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 A0A1W2PNV4 684 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 A0A1W2PRS3 328 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 LNP1A1A4G5 178 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 ANKRD30BLA7E2S9 258 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 B4E171 279 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 BET1O15155 118 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 KLF7O75840 302 aaPredicted RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 TRIOO75962 3097 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 GSTP1P09211 210 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 GNRHRP30968 328 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 TSPAN7P41732 249 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 MAGEA5P43359 124 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 MRPL49Q13405 166 aaKnown RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 CLPPQ16740 277 aaPredicted RBP8.95□□□□□ -0.98
MCF2-209ENST00000520602 ACTBL2Q562R1 376 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 ESCO2Q56NI9 601 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 SLC25A26Q70HW3 274 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 TMPRSS7Q7RTY8 843 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 MKXQ8IYA7 352 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 RADILQ96JH8 1075 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 SLC5A7Q9GZV3 580 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 CDH20Q9HBT6 801 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 RBMXL2O75526 392 aaKnown RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 RAB6AP20340 208 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 THBS4P35443 961 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 SERPINF1P36955 418 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 LUMP51884 338 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 PHLDA2Q53GA4 152 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 PABPC1L2AQ5JQF8 200 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ATPAF1Q5TC12 328 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZNF585AQ6P3V2 769 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 PPP1R32Q7Z5V6 425 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 TERB2Q8NHR7 220 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 PPP1R1CQ8WVI7 109 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 HES7Q9BYE0 225 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 SMIM3Q9BZL3 60 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 KLK13Q9UKR3 277 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 UBE2J1Q9Y385 318 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 A0A0B4J2A0 478 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 DIRAS3O95661 229 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ISG15P05161 165 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZNF44P15621 663 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 RAB35Q15286 201 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 DRAM2Q6UX65 266 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 RELL2Q8NC24 303 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 IL1F10Q8WWZ1 152 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZNF2Q9BSG1 426 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 SRXN1Q9BYN0 137 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 TREM1Q9NP99 234 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 SHPKQ9UHJ6 478 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 PMS2P1A4D2B8 440 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 TRAPPC2LH3BP13 241 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZIC3O60481 467 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZNF205O95201 554 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 GABRA1P14867 456 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 FSTP19883 344 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 CNR1P21554 472 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 IKZF1Q13422 519 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 OR5AS1Q8N127 324 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 FBXL14Q8N1E6 418 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 TMEM105Q8N8V8 129 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 MED30Q96HR3 178 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 PRR13Q9NZ81 148 aa8.94□□□□□ -0.98
MCF2-209ENST00000520602 KLF13Q9Y2Y9 288 aaPredicted RBP8.94□□□□□ -0.98
MCF2-209ENST00000520602 RAB27BO00194 218 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 PET100P0DJ07 73 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 DUSP1P28562 367 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 LYG2Q86SG7 212 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 FAAP24Q9BTP7 215 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 ST3GAL6Q9Y274 331 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 KCNK7Q9Y2U2 307 aa8.93□□□□□ -0.98
MCF2-209ENST00000520602 LY6G6EA0A0G2JKS1 128 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms