RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IGHV2-70P01814 119 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 SLPIP03973 132 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CRYGBP07316 175 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 IL6RP08887 468 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 HLA-DOBP13765 273 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 PPP3CBP16298 524 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MAKP20794 623 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CD40LGP29965 261 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 DCTDP32321 178 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 UGT2B10P36537 528 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 RPL4P36578 427 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 IFNGR2P38484 337 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CD79BP40259 229 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 AQP2P41181 271 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 NKX2-1P43699 371 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 OR3A2P47893 321 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 SELENOPP49908 381 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 RAB9AP51151 201 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 BIDP55957 195 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 POU3F1Q03052 451 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 LTBQ06643 244 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 TFF3Q07654 80 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 LGALS3BPQ08380 585 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 DGCR6Q14129 220 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ESPL1Q14674 2120 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 GUSBP1Q15486 140 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MS4A18Q3C1V0 323 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CLVS2Q5SYC1 327 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 FBXW9Q5XUX1 488 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 LCN8Q6JVE9 175 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 TFAP2EQ6VUC0 442 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ZNF841Q6ZN19 808 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MBOAT2Q6ZWT7 520 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ABHD12BQ7Z5M8 362 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 TSEN54Q7Z6J9 526 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 RNF113BQ8IZP6 322 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 FAM58AQ8N1B3 248 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MUC20Q8N307 709 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 ZIC4Q8N9L1 334 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 OR4D6Q8NGJ1 314 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 OR5M8Q8NGP6 311 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 OR6N1Q8NGY5 312 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 OR52I2Q8NH67 350 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 NTN5Q8WTR8 489 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 NEU4Q8WWR8 484 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 ACOT11Q8WXI4 607 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 NRGNQ92686 78 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 SNAPC3Q92966 411 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 LHX4Q969G2 390 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 POP5Q969H6 163 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 TXNDC15Q96J42 360 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 WFIKKN1Q96NZ8 548 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ZNF385AQ96PM9 386 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 TNFRSF13CQ96RJ3 184 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 SLC29A1Q99808 456 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 EMC6Q9BV81 110 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CHID1Q9BWS9 393 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ACTR6Q9GZN1 396 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 HDHD2Q9H0R4 259 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 LRMDAQ9H2I8 198 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 FKRPQ9H9S5 495 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 IL1RAPQ9NPH3 570 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 AKIP1Q9NQ31 210 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MEPEQ9NQ76 525 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 INIPQ9NRY2 104 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 GPR173Q9NS66 373 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 FKBP14Q9NWM8 211 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ASB6Q9NWX5 421 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MED29Q9NX70 200 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 MRPL39Q9NYK5 338 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 TAS2R5Q9NYW4 299 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 ZNF229Q9UJW7 825 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 POMPQ9Y244 141 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 CSDC2Q9Y534 153 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 FLVCR1Q9Y5Y0 555 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 POLEQ07864 2286 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 BAHCC1Q9P281 2608 aa2.38□□□□□ -2.03
SKP1-204ENST00000517691 USP9YO00507 2555 aaPredicted RBP2.38□□□□□ -2.03
SKP1-204ENST00000517691 CENPEQ02224 2701 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ZNF407Q9C0G0 2248 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 TRAV27A0A087WT01 109 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 A0A1W2PR80 420 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 SH3PXD2BA1X283 911 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 RNF222A6NCQ9 220 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 UNC119BA6NIH7 251 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 VWC2LB2RUY7 222 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ZNF587BE7ETH6 402 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 NBR2O15453 112 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 CLOCKO15516 846 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 HPRP00739 348 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 SEMG1P04279 462 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 ERCC1P07992 297 aaPredicted RBP2.37□□□□□ -2.03
SKP1-204ENST00000517691 ASAH2BP0C7U1 165 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 NR4A1P22736 598 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 FPR3P25089 353 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 EDNRAP25101 427 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 SLC9A3P48764 834 aa2.37□□□□□ -2.03
SKP1-204ENST00000517691 COMPP49747 757 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms