RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TTC25Q96NG3 672 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 MS4A4EQ96PG1 132 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZNF471Q9BX82 626 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 COPS7BQ9H9Q2 264 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 RHOFQ9HBH0 211 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 NKIRAS2Q9NYR9 191 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 MTFP1Q9UDX5 166 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 CYB5R1Q9UHQ9 305 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 RASD1Q9Y272 281 aa-2.82□□□□□ -2.86
RNU6-539P-201ENST00000516665 RP1P56715 2156 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TRBV24-1A0A075B6N3 115 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 RFPL4AA6NLU0 287 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 RFPL4AL1F8VTS6 287 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 M0R1X1 148 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 LECT2O14960 151 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 IGHV2-5P01817 119 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 CCDC175P0C221 793 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 SPNP16150 400 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 SPRR2EP22531 72 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TEAD1P28347 426 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 GNRHRP30968 328 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 PPP1CAP62136 330 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TWF1Q12792 350 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR5I1Q13606 314 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 OPN5Q6U736 354 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 GLIPR1L1Q6UWM5 242 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 KLHL7Q8IXQ5 586 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 PYROXD1Q8WU10 500 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 CNDP1Q96KN2 507 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TAPBPLQ9BX59 468 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TOLLIPQ9H0E2 274 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 CST9LQ9H4G1 147 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 TRABDQ9H4I3 376 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 FAM153AQ9UHL3 310 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 NDRG2Q9UN36 371 aaKnown RBP-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 DNHD1Q96M86 4753 aa-2.83□□□□□ -2.86
RNU6-539P-201ENST00000516665 RALGAPA2Q2PPJ7 1873 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 IGHV3-43A0A0B4J1X8 118 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 K7ERS5 55 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 IFIT3O14879 490 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 SIVA1O15304 175 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 SEC22BO75396 215 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 LDHAP00338 332 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 PABPC4LP0CB38 370 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 RRASP10301 218 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 GLRA2P23416 452 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 SLC6A1P30531 599 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 REG1BP48304 166 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 RAB9AP51151 201 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 RWDD2BP57060 319 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 VSX2P58304 361 aaPredicted RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 MYBPC1Q00872 1141 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 HTR4Q13639 388 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 MXD4Q14582 209 aaPredicted RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 GANABQ14697 944 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 CLECL1Q8IZS7 167 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 OR5AU1Q8NGC0 362 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 ERMNQ8TAM6 284 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 SMARCD1Q96GM5 515 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 TCEANC2Q96MN5 208 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 KCNS3Q9BQ31 491 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 PCGF6Q9BYE7 350 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 EDEM3Q9BZQ6 932 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 ZWILCHQ9H900 591 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 CISHQ9NSE2 258 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 RCL1Q9Y2P8 373 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 NPTNQ9Y639 398 aa-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 EIF4G1Q04637 1599 aaKnown RBP-2.84□□□□□ -2.86
RNU6-539P-201ENST00000516665 USP9XQ93008 2570 aaPredicted RBP-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 TMEM72A0PK05 275 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR2T8A6NH00 312 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR5B21A6NL26 309 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 A8MXE2 369 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 SH2D1AO60880 128 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 LY6HO94772 140 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 H2BFMP0C1H6 154 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 FOXA3P55318 350 aaPredicted RBP-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 RPS23P62266 143 aaKnown RBP-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 ZNF404Q494X3 552 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 LINC01620Q4KN68 170 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 JAKMIP3Q5VZ66 844 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 TMEM42Q69YG0 159 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 PRSS42Q7Z5A4 293 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 SLC35F6Q8N357 371 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 Q8N814 137 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 CYB561A3Q8NBI2 242 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 OR7G3Q8NG95 312 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 RERGQ96A58 199 aaPredicted RBP-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 NACA2Q9H009 215 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 DCAF16Q9NXF7 216 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 KCNIP3Q9Y2W7 256 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 KCNE3Q9Y6H6 103 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 ABCA13Q86UQ4 5058 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 NIPBLQ6KC79 2804 aaeCLIP-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 PKDREJQ9NTG1 2253 aa-2.85□□□□□ -2.87
RNU6-539P-201ENST00000516665 CASP8AP2Q9UKL3 1982 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 C15orf38-AP3S2A0A0A6YYH1 394 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 J3KRW8 73 aa-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 SHOX2O60902 331 aaPredicted RBP-2.86□□□□□ -2.87
RNU6-539P-201ENST00000516665 HTR2CP28335 458 aa-2.86□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms