RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 KRTAP9-8Q9BYQ0 159 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 REEP4Q9H6H4 257 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 SLA2Q9H6Q3 261 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 MAP6D1Q9H9H5 199 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 SMURF2Q9HAU4 748 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 SNTG1Q9NSN8 517 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 LIN7CQ9NUP9 197 aaKnown RBP1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 USE1Q9NZ43 259 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 DPM3Q9P2X0 92 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 ATP6V1HQ9UI12 483 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 KLHDC2Q9Y2U9 406 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 WDR45Q9Y484 360 aa1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 POLR3HQ9Y535 204 aaPredicted RBP1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 TNPO3Q9Y5L0 923 aaKnown RBP1.62□□□□□ -2.15
RNU1-48P-201ENST00000516400 NEBP20929 6669 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 A6NHS1 94 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 DUXAA6NLW8 204 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR2AT4A6NND4 320 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CD300LBA8K4G0 201 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 FAM220BPB1ANY3 271 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 BMPR1BO00238 502 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CDIPTO14735 213 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 LSM1O15116 133 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ARPC1BO15143 372 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 POLR3GO15318 223 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ZNF737O75373 536 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 MTRF1O75570 445 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 S1PR2O95136 353 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NDUFB2O95178 105 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 IFNA10P01566 189 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 GRPP07492 148 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TPM2P07951 284 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 GIG44P09565 113 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ZNF728P0DKX0 622 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CGB3P0DN86 165 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CGB7P0DN87 165 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ACADSP16219 412 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CTLA4P16410 223 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 STMN1P16949 149 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NDUFB7P17568 137 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 SDC1P18827 310 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 HTR1DP28221 377 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 BRS3P32247 399 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ADMP35318 185 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ALDH3A2P51648 485 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 F2RL1P55085 397 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 FAM3BP58499 235 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 HOXC5Q00444 222 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ECH1Q13011 328 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TOP3AQ13472 1001 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 FHL1Q13642 323 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 RFTN2Q52LD8 501 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 KLHL12Q53G59 568 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 UNC50Q53HI1 259 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TPTE2P1Q5T6R2 138 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ATAD3BQ5T9A4 648 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ATG16L1Q676U5 607 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 LCN12Q6JVE5 192 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 C5orf46Q6UWT4 87 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CYS1Q717R9 158 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TSPYL5Q86VY4 417 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 FAM185AQ8N0U4 392 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 PTGR2Q8N8N7 351 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CCDC89Q8N998 374 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 VPS37AQ8NEZ2 397 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR56A1Q8NGH5 318 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR2T11Q8NH01 316 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CASTOR1Q8WTX7 329 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR5P2Q8WZ92 322 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 STMN2Q93045 179 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 APOBEC3DQ96AK3 386 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 MTERF3Q96E29 417 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 METTL2AQ96IZ6 378 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 EAF1Q96JC9 268 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR8B4Q96RC9 309 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 BPIFA3Q9BQP9 254 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ZNF426Q9BUY5 554 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ELOVL1Q9BW60 279 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 GON7Q9BXV9 100 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 YTHDF1Q9BYJ9 559 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TMEM133Q9H2Q1 129 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 OR51I1Q9H343 314 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 EVA1AQ9H8M9 152 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 MTHFD2LQ9H903 347 aaPredicted RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NMRAL1Q9HBL8 299 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 SSU72Q9NP77 194 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 PNRC2Q9NPJ4 139 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 MIEF1Q9NQG6 463 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 PAPOLBQ9NRJ5 636 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NMRK1Q9NWW6 199 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 ETAA1Q9NY74 926 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CPSF2Q9P2I0 782 aaKnown RBP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 BAIAP2L1Q9UHR4 511 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 SNX6Q9UNH7 406 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 CELA1Q9UNI1 258 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 TIMM22Q9Y584 194 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 NUBP2Q9Y5Y2 271 aa1.61□□□□□ -2.15
RNU1-48P-201ENST00000516400 X6R8D5 127 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms