RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RCN3Q96D15 328 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 CERS2Q96G23 380 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 RDH12Q96NR8 316 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 RHOXF2Q9BQY4 288 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 EMC6Q9BV81 110 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 CLSTN2Q9H4D0 955 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 CRLF2Q9HC73 371 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 TAS2R5Q9NYW4 299 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 ZMAT5Q9UDW3 170 aaKnown RBP2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.59□□□□□ -2
HMGCS1-207ENST00000514610 CEACAM18A8MTB9 384 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 PSPHP1O15172 72 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 HSBP1O75506 76 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 KRTAP5-8O75690 187 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 CLDN6P56747 220 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 RBX1P62877 108 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 LCN2P80188 198 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 KDSRQ06136 332 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 KLHL40Q2TBA0 621 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 TTC19Q6DKK2 380 aaPredicted RBP2.58□□□□□ -2
HMGCS1-207ENST00000514610 OR2Z1Q8NG97 314 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 OR5M1Q8NGP8 315 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 PHF10Q8WUB8 498 aaKnown RBP2.58□□□□□ -2
HMGCS1-207ENST00000514610 PIH1D2Q8WWB5 315 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 GPR82Q96P67 336 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 BLZF1Q9H2G9 400 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 NCOR1P1Q9H4R4 102 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 CYP3A43Q9HB55 503 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 CSNK1G1Q9HCP0 422 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 PEF1Q9UBV8 284 aaKnown RBP2.58□□□□□ -2
HMGCS1-207ENST00000514610 CES1P1Q9UKY3 287 aa2.58□□□□□ -2
HMGCS1-207ENST00000514610 SHANK1Q9Y566 2161 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 VGLL3A8MV65 326 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 PMCHP20382 165 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 TGFBR1P36897 503 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 CFHR2P36980 270 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 TAS2R43P59537 309 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 PAFAH1B2P68402 229 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 INCA1Q0VD86 236 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 FAM53BQ14153 422 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 HADHQ16836 314 aaKnown RBP2.57□□□□□ -2
HMGCS1-207ENST00000514610 TPRG1LQ5T0D9 272 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 MFSD14CQ5VZR4 134 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 MED27Q6P2C8 311 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 PRSS54Q6PEW0 395 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 C16orf47Q6ZP98 133 aaPredicted RBP2.57□□□□□ -2
HMGCS1-207ENST00000514610 NDUFAF7Q7L592 441 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 DAW1Q8N136 415 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 LINC00304Q8N9R0 145 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 WDR31Q8NA23 367 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 TMEM159Q96B96 161 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 HEBP1Q9NRV9 189 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 TMEM100Q9NV29 134 aa2.57□□□□□ -2
HMGCS1-207ENST00000514610 HACD1B0YJ81 288 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 CCDC22O60826 627 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 KLK1P06870 262 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 NELFEP18615 380 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 CCT6AP40227 531 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 RPL18AQ02543 176 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 IL15RAQ13261 267 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 DOC2AQ14183 400 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 SP6Q3SY56 376 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 ULK3Q6PHR2 472 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 SLC25A29Q8N8R3 303 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 OR1P1Q8NH06 330 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 BAALCQ8WXS3 180 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 ARV1Q9H2C2 271 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 OR51B5Q9H339 312 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 RPRD1BQ9NQG5 326 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 DYRK4Q9NR20 520 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 CA10Q9NS85 328 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 VAX2Q9UIW0 290 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 NDRG2Q9UN36 371 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 SCN4AP35499 1836 aa2.56□□□□□ -2
HMGCS1-207ENST00000514610 BRCA1P38398 1863 aaKnown RBP2.56□□□□□ -2
HMGCS1-207ENST00000514610 IGKV1-6A0A0C4DH72 117 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 TRDMT1O14717 391 aaKnown RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 OR7C2O60412 319 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 CNMDO75829 334 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 LCA5LO95447 670 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 PTTG1O95997 202 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 PTHP01270 115 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 IGKV1-39P01597 117 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 IGKV1D-39P04432 117 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 SRMP19623 302 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 PEX19P40855 299 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 PSMD4P55036 377 aaKnown RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 TAS2R39P59534 338 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 YWHAEP62258 255 aaKnown RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 MAD2L1BPQ15013 274 aaPredicted RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 MLIPQ5VWP3 458 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 CASP12Q6UXS9 341 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 OR4M2Q8NGB6 313 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 KIAA1143Q96AT1 154 aaPredicted RBP2.55□□□□□ -2
HMGCS1-207ENST00000514610 SMARCD1Q96GM5 515 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 ALS2CR12Q96Q35 445 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 GABRG3Q99928 467 aa2.55□□□□□ -2
HMGCS1-207ENST00000514610 TMEM175Q9BSA9 504 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms