RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ST8SIA1Q92185 356 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 KTI12Q96EK9 354 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-213ENST00000514442 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-213ENST00000514442 PLEKHA2Q9HB19 425 aa11.79□□□□□ -0.52
TCOF1-213ENST00000514442 TMEM265A0A087WTH1 108 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 NPIPB8E9PQR5 432 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 YIF1AO95070 293 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 VSIG10L2P0DP72 767 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 DAOP14920 347 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 MPLP40238 635 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RBPJQ06330 500 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF124Q15973 351 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RTL6Q6ICC9 239 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF485Q8NCK3 441 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 OR4D6Q8NGJ1 314 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RNF128Q8TEB7 428 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ADGRL4Q9HBW9 690 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 DSPPQ9NZW4 1301 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PARP14Q460N5 1801 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF729A6NN14 1252 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SULT1A1P50225 295 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PPP1R1AQ13522 171 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 DHRS13Q6UX07 377 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PELI1Q96FA3 418 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 TLNRD1Q9H1K6 362 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PCED1AQ9H1Q7 454 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 A0A096LPE4 126 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 A0A1W2PPZ6 126 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PRSS37A4D1T9 235 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 MSR1P21757 451 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 LIMS1P48059 325 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 TAS2R60P59551 318 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RAB11AP62491 216 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 WNT2BQ93097 391 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 C20orf141Q9NUB4 165 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SLC22A13Q9Y226 551 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 RNF224P0DH78 156 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 DDTP30046 118 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SNCAP37840 140 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SCAND1P57086 179 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 GRB2P62993 217 aaKnown RBP11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SPEM2Q0P670 501 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 DMRTC1Q5HYR2 192 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 OR13C8Q8NGS7 320 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 LIPHQ8WWY8 451 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 PIK3IP1Q96FE7 263 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 GGACTQ9BVM4 153 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 GPR173Q9NS66 373 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 TREM2Q9NZC2 230 aa11.78□□□□□ -0.52
TCOF1-213ENST00000514442 SEMA7AO75326 666 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.52
TCOF1-213ENST00000514442 TBPP20226 339 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 IL2RGP31785 369 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 RPS18P62269 152 aaKnown RBP11.77□□□□□ -0.52
TCOF1-213ENST00000514442 DUSP2Q05923 314 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 ADIRFQ15847 76 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 REC114Q7Z4M0 266 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 OR5AS1Q8N127 324 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 MARCH1Q8TCQ1 289 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 SLC17A5Q9NRA2 495 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF230Q9UIE0 474 aaPredicted RBP11.77□□□□□ -0.52
TCOF1-213ENST00000514442 OR2A4O95047 310 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 HRH1P35367 487 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 DEFB109BQ30KR1 87 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 PWWP2BQ6NUJ5 590 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.52
TCOF1-213ENST00000514442 OR2A7Q96R45 310 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 LANCL2Q9NS86 450 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 AK3Q9UIJ7 227 aa11.77□□□□□ -0.52
TCOF1-213ENST00000514442 ZNF638Q14966 1978 aaKnown RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 A0A1W2PQF6 199 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 NKX2-2O95096 273 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 PTBP3O95758 552 aaKnown RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 WNT11O96014 354 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ZNF74Q16587 644 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 PATZ1Q9HBE1 687 aaKnown RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-213ENST00000514442 FLVCR1Q9Y5Y0 555 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 NPTNQ9Y639 398 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 EPOPA6NHQ4 379 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 CTAG2O75638 210 aa11.77□□□□□ -0.53
TCOF1-213ENST00000514442 ACTL6BO94805 426 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms