RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FOXRED1Q96CU9 486 aaPredicted RBP8.79□□□□□ -1
DDX41-216ENST00000513562 ERMAPQ96PL5 475 aaPredicted RBP8.79□□□□□ -1
DDX41-216ENST00000513562 PPP1R3EQ9H7J1 279 aa8.79□□□□□ -1
DDX41-216ENST00000513562 ABCB10Q9NRK6 738 aa8.79□□□□□ -1
DDX41-216ENST00000513562 C19orf12Q9NSK7 152 aa8.79□□□□□ -1
DDX41-216ENST00000513562 NLKQ9UBE8 527 aa8.79□□□□□ -1
DDX41-216ENST00000513562 ZNF222Q9UK12 451 aa8.79□□□□□ -1
DDX41-216ENST00000513562 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
DDX41-216ENST00000513562 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
DDX41-216ENST00000513562 IGKV1D-17A0A075B6S4 117 aa8.78□□□□□ -1
DDX41-216ENST00000513562 hCG_38984A0A1B0GV85 526 aa8.78□□□□□ -1
DDX41-216ENST00000513562 OR6C68A6NDL8 312 aa8.78□□□□□ -1
DDX41-216ENST00000513562 OR2AT4A6NND4 320 aa8.78□□□□□ -1
DDX41-216ENST00000513562 F2RL2O00254 374 aa8.78□□□□□ -1
DDX41-216ENST00000513562 ARPC3O15145 178 aa8.78□□□□□ -1
DDX41-216ENST00000513562 AKR7A2O43488 359 aa8.78□□□□□ -1
DDX41-216ENST00000513562 CHRM2P08172 466 aa8.78□□□□□ -1
DDX41-216ENST00000513562 PSKH1P11801 424 aa8.78□□□□□ -1
DDX41-216ENST00000513562 HIST1H1CP16403 213 aaKnown RBP8.78□□□□□ -1
DDX41-216ENST00000513562 ZNF823P16415 610 aa8.78□□□□□ -1
DDX41-216ENST00000513562 LMO1P25800 156 aa8.78□□□□□ -1
DDX41-216ENST00000513562 RPS27P42677 84 aaKnown RBP8.78□□□□□ -1
DDX41-216ENST00000513562 PRKXP51817 358 aa8.78□□□□□ -1
DDX41-216ENST00000513562 IL5RAQ01344 420 aa8.78□□□□□ -1
DDX41-216ENST00000513562 ZDHHC21Q8IVQ6 265 aa8.78□□□□□ -1
DDX41-216ENST00000513562 ZNRF1Q8ND25 227 aa8.78□□□□□ -1
DDX41-216ENST00000513562 TMEM185AQ8NFB2 350 aa8.78□□□□□ -1
DDX41-216ENST00000513562 OR2T12Q8NG77 320 aa8.78□□□□□ -1
DDX41-216ENST00000513562 OR4K13Q8NH42 304 aa8.78□□□□□ -1
DDX41-216ENST00000513562 MUC7Q8TAX7 377 aa8.78□□□□□ -1
DDX41-216ENST00000513562 RPL3LQ92901 407 aaKnown RBP8.78□□□□□ -1
DDX41-216ENST00000513562 MYDGFQ969H8 173 aa8.78□□□□□ -1
DDX41-216ENST00000513562 TLCD1Q96CP7 247 aa8.78□□□□□ -1
DDX41-216ENST00000513562 KCNJ15Q99712 375 aa8.78□□□□□ -1
DDX41-216ENST00000513562 MICU1Q9BPX6 476 aa8.78□□□□□ -1
DDX41-216ENST00000513562 COPS4Q9BT78 406 aa8.78□□□□□ -1
DDX41-216ENST00000513562 CHID1Q9BWS9 393 aa8.78□□□□□ -1
DDX41-216ENST00000513562 TMEM120AQ9BXJ8 343 aa8.78□□□□□ -1
DDX41-216ENST00000513562 FN3KQ9H479 309 aa8.78□□□□□ -1
DDX41-216ENST00000513562 RHBDD3Q9Y3P4 386 aa8.78□□□□□ -1
DDX41-216ENST00000513562 LCE6AA0A183 80 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 A0A1W2PPH5 198 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 A0A1W2PRQ8 180 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 UNC119BA6NIH7 251 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 TMEM210A6NLX4 147 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 ODF3BA8MYP8 253 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 RHBDL1O75783 438 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 ZFPL1O95159 310 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 NPPAP01160 153 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 GNALP38405 381 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 DYNLT3P51808 116 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 SLC7A2P52569 658 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 SLC25A1P53007 311 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 ERVFRD-1P60508 538 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 DGCR6Q14129 220 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 IFI44LQ53G44 452 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 KLHL12Q53G59 568 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 FAM76BQ5HYJ3 339 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 COQ5Q5HYK3 327 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 AGBL2Q5U5Z8 902 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 CPLX4Q7Z7G2 160 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 MRPL41Q8IXM3 137 aaKnown RBP8.77□□□□□ -1.01
DDX41-216ENST00000513562 SDR9C7Q8NEX9 313 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 FANK1Q8TC84 345 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 MALSU1Q96EH3 234 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 SDSLQ96GA7 329 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 REEP6Q96HR9 211 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 LYSTQ99698 3801 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 RTL8AQ9BWD3 113 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 PAPOLGQ9BWT3 736 aaKnown RBP8.77□□□□□ -1.01
DDX41-216ENST00000513562 KRTAP17-1Q9BYP8 105 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 NSRP1Q9H0G5 558 aaKnown RBP8.77□□□□□ -1.01
DDX41-216ENST00000513562 TBL2Q9Y4P3 447 aaKnown RBP8.77□□□□□ -1.01
DDX41-216ENST00000513562 N6AMT1Q9Y5N5 214 aa8.77□□□□□ -1.01
DDX41-216ENST00000513562 ANXA2P2A6NMY6 339 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 H0YHG0 523 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 TBX1O43435 398 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 PSG2P11465 335 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 CCL3L1P16619 93 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 SLC6A6P31641 620 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 DCTDP32321 178 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 GABRA2P47869 451 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 GSK3AP49840 483 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 RPL31P62899 125 aaKnown RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 TIGD6Q17RP2 521 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 LDLRAD2Q5SZI1 272 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 ZNF782Q6ZMW2 699 aaPredicted RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 DCXRQ7Z4W1 244 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 CENPVQ7Z7K6 275 aaPredicted RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 CYP4Z1Q86W10 505 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 CSNK2A3Q8NEV1 391 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 OR4X2Q8NGF9 303 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 OR5P3Q8WZ94 311 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 SGK3Q96BR1 496 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 MCRIP2Q9BUT9 160 aaKnown RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 PARD6BQ9BYG5 372 aa8.76□□□□□ -1.01
DDX41-216ENST00000513562 FGF23Q9GZV9 251 aaPredicted RBP8.76□□□□□ -1.01
DDX41-216ENST00000513562 USE1Q9NZ43 259 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms