RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RBM45Q8IUH3 476 aaKnown RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 LINC01555Q8NAE3 123 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 GPR119Q8TDV5 335 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 GPR78Q96P69 363 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 NIPSNAP1Q9BPW8 284 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 PRDM6Q9NQX0 595 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 CEPT1Q9Y6K0 416 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 STRCQ7RTU9 1775 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 F8W036 122 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 TNFSF12O43508 249 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 GSTZ1O43708 216 aaPredicted RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 UPK1BO75841 260 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 DHRS3O75911 302 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 PEX11BO96011 259 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 VDAC1P21796 283 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 GNG10P50151 68 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 CLDN12P56749 244 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 RHOBP62745 196 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 GABRA6Q16445 453 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 FAM214BQ7L5A3 538 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 CCL19Q99731 98 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 ZMAT5Q9UDW3 170 aaKnown RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 MYH4Q9Y623 1939 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 MYH8P13535 1937 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 SPP1P10451 314 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 MGST1P10620 155 aaKnown RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 TAGLN2P37802 199 aaKnown RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 ASCL1P50553 236 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 VN1R4Q7Z5H5 301 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 TUSC5Q8IXB3 177 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 ZNF683Q8IZ20 524 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 SLC38A6Q8IZM9 456 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 NANOGP1Q8N7R0 232 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 DOK1Q99704 481 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 ARPC5LQ9BPX5 153 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 ACOXLQ9NUZ1 547 aa3.79□□□□□ -1.8
VCAN-209ENST00000513016 TXNL4BQ9NX01 149 aaKnown RBP3.79□□□□□ -1.8
VCAN-209ENST00000513016 A0A0B4J2E0 115 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 A0A1B0GX12 115 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TXNDC12O95881 172 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 RBP4P02753 201 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ORM1P02763 201 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 MGMTP16455 207 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 RAB6AP20340 208 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 GCAP28676 217 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SMAGPQ0VAQ4 97 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 DLEU7Q6UYE1 221 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SKA3Q8IX90 412 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OTOSQ8NHW6 89 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CISD1Q9NZ45 108 aaKnown RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 A0A1W2PR80 420 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SHISA8B8ZZ34 492 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 GPR31O00270 319 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PLPP3O14495 311 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TAAR5O14804 337 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 EPPINO95925 133 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 EPHA2P29317 976 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 HOXA6P31267 233 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CDAP32320 146 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TNFSF8P32971 234 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ID1P41134 155 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SSBP1Q04837 148 aaKnown RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 FAHD2BQ6P2I3 314 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZNF788Q6ZQV5 615 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZFP82Q8N141 532 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 APH1BQ8WW43 257 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FAHD2AQ96GK7 314 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TPPP3Q9BW30 176 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 GABARAPL1Q9H0R8 117 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 LPAR2Q9HBW0 351 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 IL36GQ9NZH8 169 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FZR1Q9UM11 496 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SLC22A13Q9Y226 551 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ARPC4-TTLL3A0A0A6YYG9 625 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PNPP00491 289 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR5H8P0DN80 308 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FCGR2CP31995 323 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FOXO1Q12778 655 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR2G2Q8NGZ5 317 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 NUDT8Q8WV74 236 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 RNF2Q99496 336 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PCYT1BQ9Y5K3 369 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 INSIG2Q9Y5U4 225 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 H3BMQ9 156 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CCL3P10147 92 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SPANXN5Q5MJ07 72 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZNF774Q6NX45 483 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 GLCCI1Q86VQ1 547 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TMEM251Q8N6I4 163 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR10R2Q8NGX6 335 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SAT2Q96F10 170 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 SEC22CQ9BRL7 303 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PPIL3Q9H2H8 161 aaKnown RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 SPNS1Q9H2V7 528 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 GPR35Q9HC97 309 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZNF331Q9NQX6 463 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 MIOXQ9UGB7 285 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 IL19Q9UHD0 177 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms